G1209648


Basic Information

Item Value
gene id G1209648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6820138 ~ 6820433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1381403
AGACAGACAGCTGTCAGCAGGGTGCCCTTGGGAGGGCaggagaaggaagaagagggagatgaggaggaggggggtataGGAGAAgagtagatacagttgaagtcggaagattacatacaccttagccaaatacatttaaactcagtttttcacaattccacaATTTAATCCTAGTGTGTGTTCCACCGGggcttttcatattgcaaatggaacccaagtcaacatccaaaagcaacattttgaaaaaagaataaaaaataaaaaaacttatcaccccttaaaaaagtgctttctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1381403 True 296 lncRNA 0.41 1 6820138 6820433

Neighbor

gene id symbol gene type direction distance location
LOC110488646 LOC106604864 coding upstream 10056 6765164 ~ 6810082 (+)
LOC110487700 LOC106604865 coding upstream 79216 6718527 ~ 6740922 (+)
LOC110488643 LOC106604862 coding upstream 109000 6707877 ~ 6711138 (+)
LOC110488638 LOC106604859 coding upstream 116940 6699386 ~ 6703198 (+)
LOC110488640 LOC106604860 coding upstream 121166 6688174 ~ 6698972 (+)
LOC110488650 LOC106611908 coding downstream 24787 6845220 ~ 6886525 (+)
dock2 LOC106604826 coding downstream 112627 6933060 ~ 6937910 (+)
LOC110488657 LOC106604826 coding downstream 119977 6940410 ~ 7081993 (+)
LOC118938692 LOC106611811 coding downstream 262750 7083183 ~ 7087463 (+)
LOC110488658 LOC106604872 coding downstream 354743 7175176 ~ 7228229 (+)
G1209645 NA non-coding upstream 3575 6816324 ~ 6816563 (+)
G1209639 NA non-coding upstream 7712 6812071 ~ 6812426 (+)
G1209573 NA non-coding upstream 8551 6811093 ~ 6811587 (+)
G1209572 NA non-coding upstream 63327 6752864 ~ 6756811 (+)
G1209621 NA non-coding upstream 69823 6750096 ~ 6750315 (+)
G1209649 NA non-coding downstream 94 6820527 ~ 6820766 (+)
G1209943 NA non-coding downstream 6423 6826856 ~ 6827077 (+)
G1209945 NA non-coding downstream 10768 6831201 ~ 6831426 (+)
G1209951 NA non-coding downstream 15958 6836391 ~ 6836786 (+)
G1210032 NA non-coding downstream 155934 6976367 ~ 6976683 (+)
G1209622 NA other upstream 68424 6751352 ~ 6751714 (+)
G1209615 LOC106604863 other upstream 75348 6743934 ~ 6744790 (+)
G1208884 NA other upstream 912369 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1897578 4922141 ~ 4922560 (+)
LOC110488661 diaph1 other downstream 498587 7251365 ~ 7385487 (+)
G1210502 NA other downstream 611944 7432377 ~ 7435168 (+)
G1210520 LOC106604879 other downstream 639415 7459848 ~ 7481225 (+)
G1210695 NA other downstream 990698 7811131 ~ 7811872 (+)
G1210708 LOC106604831 other downstream 1008390 7828823 ~ 7836843 (+)

Expression


Co-expression Network