G1209943


Basic Information

Item Value
gene id G1209943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6826856 ~ 6827077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1381729
gagcgtgaaaaacccagcagcgttgcagttcttgacactcaaaccagtactaccataccccgttcaaaggcacttcactATTTTGTCTTgcatattcaccctctgaatggcacacatacacaatccatgtatcaattgtctcaaggcttaaaaatccttcttaacctgtctcctccccttcatccatacagattgaagtggatttaggtgacatcaacaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1381729 True 222 lncRNA 0.43 1 6826856 6827077

Neighbor

gene id symbol gene type direction distance location
LOC110488646 LOC106604864 coding upstream 16774 6765164 ~ 6810082 (+)
LOC110487700 LOC106604865 coding upstream 85934 6718527 ~ 6740922 (+)
LOC110488643 LOC106604862 coding upstream 115718 6707877 ~ 6711138 (+)
LOC110488638 LOC106604859 coding upstream 123658 6699386 ~ 6703198 (+)
LOC110488640 LOC106604860 coding upstream 127884 6688174 ~ 6698972 (+)
LOC110488650 LOC106611908 coding downstream 18143 6845220 ~ 6886525 (+)
dock2 LOC106604826 coding downstream 105983 6933060 ~ 6937910 (+)
LOC110488657 LOC106604826 coding downstream 113333 6940410 ~ 7081993 (+)
LOC118938692 LOC106611811 coding downstream 256106 7083183 ~ 7087463 (+)
LOC110488658 LOC106604872 coding downstream 348099 7175176 ~ 7228229 (+)
G1209649 NA non-coding upstream 6090 6820527 ~ 6820766 (+)
G1209648 NA non-coding upstream 6423 6820138 ~ 6820433 (+)
G1209645 NA non-coding upstream 10293 6816324 ~ 6816563 (+)
G1209639 NA non-coding upstream 14430 6812071 ~ 6812426 (+)
G1209573 NA non-coding upstream 15269 6811093 ~ 6811587 (+)
G1209945 NA non-coding downstream 4124 6831201 ~ 6831426 (+)
G1209951 NA non-coding downstream 9314 6836391 ~ 6836786 (+)
G1210032 NA non-coding downstream 149290 6976367 ~ 6976683 (+)
G1210049 NA non-coding downstream 173656 7000733 ~ 7033818 (+)
G1210015 NA non-coding downstream 175810 7002887 ~ 7006485 (+)
G1209572 NA other upstream 70045 6752864 ~ 6756811 (+)
G1209622 NA other upstream 75142 6751352 ~ 6751714 (+)
G1209615 LOC106604863 other upstream 82066 6743934 ~ 6744790 (+)
G1208884 NA other upstream 919087 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1904296 4922141 ~ 4922560 (+)
LOC110488661 diaph1 other downstream 491943 7251365 ~ 7385487 (+)
G1210502 NA other downstream 605300 7432377 ~ 7435168 (+)
G1210520 LOC106604879 other downstream 632771 7459848 ~ 7481225 (+)
G1210695 NA other downstream 984054 7811131 ~ 7811872 (+)
G1210708 LOC106604831 other downstream 1001746 7828823 ~ 7836843 (+)

Expression


Co-expression Network