Gene
RNA
| Item | Value |
|---|---|
| gene id | G1210049 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 7000733 ~ 7033818 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1381847 | False | 301 | lncRNA | 0.48 | 2 | 7000733 | 7015398 |
| TU1381848 | True | 442 | lncRNA | 0.49 | 3 | 7012757 | 7033818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dock2 | LOC106604826 | coding | upstream | 62823 | 6933060 ~ 6937910 (+) |
| LOC110488650 | LOC106611908 | coding | upstream | 114208 | 6845220 ~ 6886525 (+) |
| LOC110488646 | LOC106604864 | coding | upstream | 190651 | 6765164 ~ 6810082 (+) |
| LOC110487700 | LOC106604865 | coding | upstream | 259811 | 6718527 ~ 6740922 (+) |
| LOC110488643 | LOC106604862 | coding | upstream | 289595 | 6707877 ~ 6711138 (+) |
| LOC118938692 | LOC106611811 | coding | downstream | 49365 | 7083183 ~ 7087463 (+) |
| LOC110488658 | LOC106604872 | coding | downstream | 141358 | 7175176 ~ 7228229 (+) |
| LOC110488659 | NA | coding | downstream | 213961 | 7247779 ~ 7249658 (+) |
| LOC110488661 | diaph1 | coding | downstream | 217547 | 7251365 ~ 7385487 (+) |
| LOC118938693 | NA | coding | downstream | 422064 | 7455882 ~ 7459050 (+) |
| G1210032 | NA | non-coding | upstream | 24050 | 6976367 ~ 6976683 (+) |
| G1209951 | NA | non-coding | upstream | 163947 | 6836391 ~ 6836786 (+) |
| G1209945 | NA | non-coding | upstream | 169307 | 6831201 ~ 6831426 (+) |
| G1209943 | NA | non-coding | upstream | 173656 | 6826856 ~ 6827077 (+) |
| G1209649 | NA | non-coding | upstream | 179967 | 6820527 ~ 6820766 (+) |
| LOC110488657 | LOC106604826 | non-coding | downstream | 12918 | 6940410 ~ 7081993 (+) |
| G1210338 | NA | non-coding | downstream | 211244 | 7245062 ~ 7245273 (+) |
| G1210496 | NA | non-coding | downstream | 381941 | 7415759 ~ 7417025 (+) |
| G1209572 | NA | other | upstream | 243922 | 6752864 ~ 6756811 (+) |
| G1209622 | NA | other | upstream | 249019 | 6751352 ~ 6751714 (+) |
| G1209615 | LOC106604863 | other | upstream | 255943 | 6743934 ~ 6744790 (+) |
| G1208884 | NA | other | upstream | 1092964 | 5903921 ~ 5907769 (+) |
| G1207553 | NA | other | upstream | 2078173 | 4922141 ~ 4922560 (+) |
| G1210502 | NA | other | downstream | 398559 | 7432377 ~ 7435168 (+) |
| G1210520 | LOC106604879 | other | downstream | 426030 | 7459848 ~ 7481225 (+) |
| G1210695 | NA | other | downstream | 777313 | 7811131 ~ 7811872 (+) |
| G1210708 | LOC106604831 | other | downstream | 795005 | 7828823 ~ 7836843 (+) |
