G1210591


Basic Information

Item Value
gene id G1210591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 7604304 ~ 7605007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1382493
CCGAAACGGAAGTCACCTTTCCACGAGCCAGTGGTCAGAAAGGAGTCGTATTGGTCATCTTTCAGGACAGTTCCACACCGGCTGACGTCAGCGTATCTCGGGGGGCCGTAGACCGCGGGGAAGACTGGGAGGCTAGACGCGCGGTACACAAACCCGCGTCGACACATCCTGAAGTACACGACCGCACTGATCAGAACAAGGAGGAGAGAAGACACGGTCGCCAGGGCGATTTTCAAATAAAGCGTCAAATTATAGCTCGCCTGTGAGTCATCGTCCGTGTTCTCAAAAAGCTCATTTAAAACAGGCATGTCATCGCCAATGACTACATTGACTGTGGCAGTGGCTGAGAGAGACTGAGGCCCGTTGTCCCTTACCATGATGACAAGAGTTTGTTTAGGCTCGTCCTGCTCTACAAATGGCCTCACAGTCCGGATTTCCCCGCTGTGCAGGCCCACAGTGAAGAGGTTGGGCTGTGACGCTTTGACCACATGGTAGGAGAGCCACGCGTTATTGCCAGAGTCAGCATCTACAGCAAGCACTTTGGTAACCAGGTAACCTTTAGGTGCCTCCAGTGGCACCAGGTCCTCAGCGATGAAGCCAGATGATTGGACAGGATACAGAACAACAGGTGTGTTGTCGTTATGGTCACCGACGAACACCCTCACAGTGCAAGTACTGGAAAGAGGAGTGTCACCAACGTCTTG

Function

NR:

description
protocadherin beta-16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1382493 True 704 lncRNA 0.53 1 7604304 7605007

Neighbor

gene id symbol gene type direction distance location
LOC118938693 NA coding upstream 145254 7455882 ~ 7459050 (+)
LOC110488661 diaph1 coding upstream 218817 7251365 ~ 7385487 (+)
LOC110488659 NA coding upstream 354646 7247779 ~ 7249658 (+)
LOC110488658 LOC106604872 coding upstream 376548 7175176 ~ 7228229 (+)
LOC118938692 LOC106611811 coding upstream 517588 7083183 ~ 7087463 (+)
fgf18a LOC106604790 coding downstream 371743 7976750 ~ 7986393 (+)
LOC110488706 NA coding downstream 720294 8325301 ~ 8335960 (+)
LOC110488707 apbb2 coding downstream 735198 8340205 ~ 8393946 (+)
tlr1 tlr1 coding downstream 889285 8494292 ~ 8497395 (+)
LOC110488712 LOC106604779 coding downstream 899652 8504659 ~ 8509834 (+)
G1210587 LOC106604822 non-coding upstream 6684 7596688 ~ 7597620 (+)
G1210582 LOC106604876 non-coding upstream 16761 7581108 ~ 7587543 (+)
G1210546 LOC106598371 non-coding upstream 87270 7501492 ~ 7517034 (+)
G1210549 LOC106604876 non-coding upstream 92682 7499348 ~ 7511622 (+)
G1210520 LOC106604879 non-coding upstream 125054 7459848 ~ 7481225 (+)
G1210592 LOC103373949 non-coding downstream 981 7605988 ~ 7606297 (+)
G1210594 NA non-coding downstream 7776 7612783 ~ 7613155 (+)
G1210656 LOC106604828 non-coding downstream 116036 7721043 ~ 7769888 (+)
G1210657 LOC106604828 non-coding downstream 135956 7740963 ~ 7762287 (+)
G1210682 NA non-coding downstream 178662 7783669 ~ 7783908 (+)
G1210502 NA other upstream 169136 7432377 ~ 7435168 (+)
G1209572 NA other upstream 847493 6752864 ~ 6756811 (+)
G1209622 NA other upstream 852590 6751352 ~ 6751714 (+)
G1210695 NA other downstream 206124 7811131 ~ 7811872 (+)
G1210708 LOC106604831 other downstream 223816 7828823 ~ 7836843 (+)
G1210736 LOC106596699 other downstream 293839 7898846 ~ 7922226 (+)
G1211167 NA other downstream 1159681 8764688 ~ 8765517 (+)
G1212603 NA other downstream 2020081 9539127 ~ 9677903 (+)

Expression


Co-expression Network