XLOC_031202 (glipr2)


Basic Information

Item Value
gene id XLOC_031202
gene name glipr2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 33028083 ~ 33039670 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060587
ATTAATTTGCGAttatgagtgtatatgtgtgtgtgtttgtgtgcgtgtctgtttaGAAGGAAACCAAGCATgaaaatgcgtgtgtgtgtgtgtgtgtgtgtttgtgtagtagGCTACCATCAGAATGCACTTCCCTGGTCTAGAGGGCGTTGCATCACTTGACAGATATATAGTACGGAGATTTAATGTGCAAGACAGAGTTGGCAGACAGCGCTTAAAGAAAGACAAATTCCTGCCTTTGAGCAACCAACAGAACagTTTCTCACGTAACTACATGCATGGCGGGCAGCAGTTTTGAGGCCGAGTTCCTACAGGTGCACAATGCCTACCGCAAACAGCACGGAGCTCCGCCCCTCACCTTTAACAAAAACCTGTGCCGCTCCGCACAGCAGTGGGCGGAGCATCTGCTTTCAACCAAAACACTCGCACACAGCAACAAGGGCTACGGAGAAAATTTGTATTATGCTTGGAGTTCAGCTAACAAAAAACTCACAGGACATGAGGCAGTGGACAGCTGGTACGGTGAAATTAAAGACTACAACTTCAGTAGGCCAGGATTTAGCTCCAAAACAGGTCACTTCACACAGGTGGTGTGGAAGGACACAAAAGAGTTGGGAGTTGGACTGGCCACTGATGGGAACACAATTTTTGTCGTGGGTCAGTACCTTCCCGCTGGAAACATCGCAAATGCaggttattttgaaaaaaatgtcctGCCGACTGGCTCTAAACTAGATCAAAAGTCCACTGGTGCAACTCACAAAGTGGAACAAGCTCATGGTTCATCAGGCATTCATTCAAACAAAGTGCCCTCAGTGCCTCACATTGCTGAAAAACCAACACCAGAGGGCAAAGCAGAAAGCAGTTTTGAGGCAGAGTTCTTGCAGACCCACAATGCATATCGAAAACATCATGGAGCTCCACCCCTTACCATAAACATAAACCTGAGCCGCTCTGCACAAAAGTGGGCAGAGCATCTGCTGTCAATCAGGACTCTCATGCACAGCAACGGAGACCATGGAGAAAATGTGTATTATGCTTATAACTCGGCTAACAAAAAACTCACAGGACGTGAGGCAGTGGAAAGCTGGTACAATGAAATTAAAGAGTACAACTTCAGCAGGCCTGGATTCTCCTCTAAAACAGGTCACTTCACACAGGTGGTGTGGAAGGACTCAAAAGAGTTGGGAGTTGGACTAGCCACTGATGGAAGCACAAGTTTTGTGGTGGGACAGTACCTTCCAGGAGGTAACATCACAAATGCAGGTTATTTTGAGAGAAATGTCCTACCGGGGGGATCCAAAGTAGACCTCAAAGCCACCCCACCTGTGGACAAAGTTGGACAAGCTCGTGGTGCCCTTAGCATTACGTCCAACCTGTTGCCTTCATCATCTCACAGTGTTGGACCAGCACCACCGAAGACTCATTCTCCACAGAGCAGCCACTCAGAGAGTGAGAGCTTGTTCCAGTTTCGTCAGTCTCTCCTTAAAGCTGTAAATGATTACAGACGACAACATGGGGCAAAACCTCTCTCTCTGTGCCCTGTCCTCAGTAAAGAGGCTCAGGATTGGGCAGCACATCTAGCCAGCATTGGTGCCCTACAGAACAGCAGAAAAGGTTACGGAGAGACTTTGTCTTACAAATGGACATCCAGTATGGTTCCTCCAACAGGAAAAGAGGTTGCTGAAAACTGGTACAAGGATAATGTGAAGTACAACTTTGCCATTCCTGGATTTCAGAAAGGAACTGGTAACTTTACCCAGATGATCTGGAGGTCTTCAGAGCAAGTTGGTGTTGGTTTGGGATCAGATGGAAAGGGCATGTTCATTACTGTGGCCTTCTACAACCCTTCTGGAAACATCACCAACCCTGGCTTCTTCCAGGATAATGTCAGACCTTCTGGGAGGTGACCTGCTGAATAAGAAAGATTAAGAAAATTTTGCATCTTGTTTTACTTGCtagtttataaattttttaaaggcATTTATCTCAGGTTTAGTGTTTGCATAGTTACTGCACTTTGCCTTTGTAGGGGAGAATATGGCAATATATTCATACAGTATGTTTGTCATCTAAATATATATCATAAACATAAACATCAGTTCACAAATTTTAGCTGCACCGTTGAATGTAGATGCTTTTTTAAAGGTTCTGGTGTAgataaatgaatattatttgcTTAGGTGGTTTTCTTTCCTTTACCCTAATAAGCAATCGCATGCACCTGCTATAGATTTGCATGATTGGTTTTAATGAGAAGTGACTTCAAATGTATAGAAAGATGAGGTGATAAATCATAATGAAACATTAAAATGGATTTTGCatattatatatgtttaaatatgttgctttaataaaaatgtttgtaaaattcAAGTAATTTCTGCAGTTTGACAGATATTAAACACTGAAACTTTTCACTAAACAGTGCTAATAGAGACTATAAGCAAAAGGGaagataaattatattttaaagaatctgTGTTACTGTACAACAAACCTGAAAATAGGAATCAAGggagaaaaaacaagatttttaaaGCATTTCCCTAAATTATCATGAAATATATTGTAAATTCAATCTGTAAAGCAGTATGAAAATGAAGAATGGATAAATGCACAGAACATCTTGTCAGtacaaaaaaaactttgagaTATGTTGCTGCTGAAAGTTATTTAACCTCTTTCCTACACAGAGAGACTTGTACTTTGACttctcatttaataatttttatcctGTAAAGACTGTATATTCTGTCTCCCTTCCCAAAACCTCAcataaaacattgtacattttattttaatctgtttGATTTATTAGCTGttttcctaaaaaacaaacaaacctatATGTGATGAATACAAAGTATCCCCtgccacacacatgcacacagacccTCATAGATTGCATTCTTATACGCAAATGTTTATCAACATATGCATCTAGATGTGCACATCTATCTTGCACAGCACCATAGAGCTTGGGTGGGAATGCGAAATTGAATTGACAAGGTGTCATGTTGCATAAGCCTCTCAGCACATTGTGTTGCTGGAGACACATGAGATGCTCTGATCTTCATTTATACATGCCCTCTTTCACGAATACACAGGCTGAATAAAACAAAGGTCAAACACTTGATCAGCTAAAATCCACAGACCTTTACTGTGGTGGGGGTCTAGTTTCACattggaaaaaaaggaaaaaccttattgaaatgtaaatattactTTATCAATAATAGTCTTtagaataaaacatttcaaacaaaACACATGAATGCTGCATTATAAAACAGGAATATGCACAATATTGAACAGCATTCAAGGCTTTTTCAGACTTATGCATTTGTTAATACAATTCTACTTGAATGGATGTGTTTTGTCTGGTTaaactgaaattttttttaaataaaataaaaattcagtgtATTATAA
>TCONS_00060588
GCAGGCAGCAGTTTTGAGGCCGAGTTCCTACAGGTGCACAATGCCTACCGCAAACAGCACGGAGCTCCGCCCCTCACCTTTAACAAAAACCTGTGCCGCTCCGCACAGCAGTGGGCGGAGCATCTGCTTTCAACCAAAACACTCGCACACAGCAACAAGGGCTACGGAGAAAATTTGTATTATGCTTGGAGTTCAGCTAACAAAAAACTCACAGGACATGAGGCAGTGGACAGCTGGTACGGTGAAATTAAAGACTACAACTTCAGTAGGCCAGGATTTAGCTCCAAAACAGGTCACTTCACACAGGTGGTGTGGAAGGACACAAAAGAGTTGGGAGTTGGACTGGCCACTGATGGGAACACAATTTTTGTCGTGGGTCAGTACCTTCCCGCTGGAAACATCGCAAATGCaggttattttgaaaaaaatgtcctGCCGACTGGCTCTAAACTAGATCAAAAGTCCACTGGTGCAACTCACAAAGTGGAACAAGCTCATGGTTCATCAGGCATTCATTCAAACAAAGTGCCCTCAGTGCCTCACATTGCTGAAAAACCAACACCAGAGGGCAAAGCAGAAAGCAGTTTTGAGGCAGAGTTCTTGCAGACCCACAATGCATATCGAAAACATCATGGAGCTCCACCCCTTACCATAAACATAAACCTGAGCCGCTCTGCACAAAAGTGGGCAGAGCATCTGCTGTCAATCAGGACTCTCATGCACAGCAACGGAGACCATGGAGAAAATGTGTATTATGCTTATAACTCGGCTAACAAAAAACTCACAGGACGTGAGGCAGTGGAAAGCTGGTACAATGAAATTAAAGAGTACAACTTCAGCAGGCCTGGATTCTCCTCTAAAACAGGTCACTTCACACAGGTGGTGTGGAAGGACTCAAAAGAGTTGGGAGTTGGACTAGCCACTGATGGAAGCACAAGTTTTGTGGTGGGACAGTACCTTCCAGGAGGTAACATCACAAATGCAGGTTATTTTGAGAGAAATGTCCTACCGGGGGGATCCAAAGTAGACCTCAAAGCCACCCCACCTGTGGACAAAGTTGGACAAGCTCGTGGTGCCCTTAGCATTACGTCCAACCTGTTGCCTTCATCATCTCACAGTGTTGGACCAGCACCACCGAAGACTCATTCTCCACAGAGCAGCCACTCAGAGAGTGAGAGCTTGTTCCAGTTTCGTCAGTCTCTCCTTAAAGCTGTAAATGATTACAGACGACAACATGGGGCAAAACCTCTCTCTCTGTGCCCTGTCCTCAGTAAAGAGGCTCAGGATTGGGCAGCACATCTAGCCAGCATTGGTGCCCTACAGAACAGCAGAAAAGGTTACGGAGAGACTTTGTCTTACAAATGGACATCCAGTATGGTTCCTCCAACAGGAAAAGAGGTTGCTGAAAACTGGTACAAGGATAATGTGAAGTACAACTTTGCCATTCCTGGATTTCAGAAAGGAACTGGTAACTTTACCCAGATGATCTGGAGGTCTTCAGAGCAAGTTGGTGTTGGTTTGGGATCAGATGGAAAGGGCATGTTCATTACTGTGGCCTTCTACAACCCTTCTGGAAACATCACCAACCCTGGCTTCTTCCAGGATAATGTCAGACCTTCTGGGAGGTGA

Function

symbol description
glipr2 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood cell and vascular endothelium. Orthologous to human GLIPR2 (GLI pathogenesis related 2).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-030131-4424 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood cell and vascular endothelium. Orthologous to human GLIPR2 (GLI pathogenesis related 2).

Ensembl:

ensembl_id ENSDARG00000041724

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060587 False 3435 mRNA 0.40 13 33028083 33039670
TCONS_00060588 True 1629 mRNA 0.48 11 33029608 33035295

Neighbor

gene id symbol gene type direction distance location
XLOC_031201 TUBB4B coding downstream 6069 33018764 ~ 33022014 (-)
XLOC_031200 NA coding downstream 100164 32922656 ~ 32927919 (-)
XLOC_031199 pole3 coding downstream 137276 32888119 ~ 32890807 (-)
XLOC_031198 NA coding downstream 142209 32885179 ~ 32885874 (-)
XLOC_031197 lrsam1 coding downstream 145921 32865364 ~ 32882162 (-)
XLOC_031203 si:dkey-226m8.10 coding upstream 160328 33199998 ~ 33215389 (-)
XLOC_031204 kank1b coding upstream 182454 33222124 ~ 33236637 (-)
XLOC_031205 prkaa1 coding upstream 198875 33238545 ~ 33255759 (-)
XLOC_031206 ifitm1 coding upstream 218619 33258289 ~ 33259079 (-)
XLOC_031207 kyat1 coding upstream 225172 33264842 ~ 33281156 (-)
XLOC_031195 NA non-coding downstream 243283 32782667 ~ 32784800 (-)
XLOC_031194 NA non-coding downstream 290925 32560580 ~ 32737158 (-)
XLOC_031193 NA non-coding downstream 491334 32516671 ~ 32536749 (-)
XLOC_031209 CU019641.3 non-coding upstream 245856 33285526 ~ 33285597 (-)
XLOC_031210 NA non-coding upstream 246917 33286587 ~ 33286658 (-)
XLOC_031218 BX296533.1 non-coding upstream 1198237 34237907 ~ 34238023 (-)
XLOC_031221 BX530075.3 non-coding upstream 1794308 34833978 ~ 34834093 (-)
XLOC_031229 NA non-coding upstream 2483739 35523409 ~ 35540980 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_07382447_07388182 GLIPR2 coding CI01000339 null 7382447 ~ 7388182 (-)