XLOC_031204 (kank1b)


Basic Information

Item Value
gene id XLOC_031204
gene name kank1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 33222124 ~ 33236637 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060591
GTACGGAGAAGAGTAGAGCGAAAAGATCAGTGTGTTGGAAGCAAGTGTGCAAAAACACAGAGTCAATGTGTTGGGACAACAGTGTGCATGTGTGATGCCACCACAATTACTTTAGAGACAATGAAGAACAGGAGGAACATTTCCTACCGAACGGTGGGCTGCGGTGACTATATGGTCAATGCGGACCTCAGACCAATCAAATCCTTTGTTTCCCAAGGAACTGTCACTGACCCTATCAGAAGTGTTGACCTGGGTGTAATGGTAATCCCTCAGACTGTGTCGCAGCGTACTAGCACAGCCTTTTGCACCATCTCACGCAGCACCAGTACTTTGCAGGCCTGCGTCTCCGAAGCCAGCACCAACACAAAGCACACACTCACCAGAGAAAGACATACCAACACGGCcaacacagtcaccagatctctgGCAATTGGGGATGGAAAGGTTTGTGACAGAGTGGCTGCTGTTCAAATGCGAACTGTTGGAACCACTGCATACCTAGACGGGTGCACTAGTGCTCCTGATGTCCCAAATGTAAAGACATGTGACATCGGTGTTGGGATGGCAAATATAAATGAGAATATCCTCATCGGACTCCATACACGCAACATTGCATGTGGACCATCGCGTCTCCCGGATCCAGTCAAAACGCGTAGCATCGGTGTAGAAGTGGGAGACGGTAGGATACGTGACCCAGAGGGTCAGATGTTTGTGCAGAACGAGCCTGGTCTTGATCATTACATAGATCGCATGCAGAAATTACTTAAAGAACAGCAGGACCTGTTAACAGACAGTCACACCGGGTCAAAACCTGACCTCATTCTCCAATCCCAGTTCTACTCAGATGAGCAAATCAGAGTTACTGAGCACAGCCAGGCATCACACGAGGCTTCAGGCATTAAACCGAAGAATCAAATGGAGTGGCAGATGTCCACTGCTCTTCATGGCTCTTCTGTTGATGACCGCTGTATCAGGTCTGTCATGAAAAGGAAAAGCACTAATCTGACGTCCTCAGATAGTATGAAGACTAAAAGTGCAGCAGTTGGAGGTATTATGGTCCCGATTTCTGAGGGTGGTGATTCTGAGGATGGAGAGAAGAAAAAGAGGGAGAAAGAGGAGAATGCCAGAATTAAAATGAAGATtcctaaaagaaaagaaagGTATAGATTTAGTGAGAAGATGCTTTCTGCGTGCCAAACTCTCGAGATTCACCTCAATGGCAGCAAGACCATATCCAATAGAGAACATCGCTCCTGTTTGAGCACAGTGCAGCAGGAGTGGTTCTGTGTGTCCAGTCAAAAGAGGGTTTGCCCACAGATCGTGGAGGACTTCCTATTCGCCTGCTGCCAAGTCTCGCCAGACGTTCTCTGCTATGTGGCCAACATGCCTGACCAAAATGGCAACACCGCCCTGCACTACAGCGTGTCTCACTCTAATTTCAGTGTAGTAAAGGTTCTGCTTGCTGCAGGTGTGTGTAATATTGATCATCAGAATAAGGCTGGCTATACTCCCATAATGCTTGCCTCCCTGGCTGCGGTGGAAACTAAAGAAGACATGATAGTGGTTCAAGAACTTTTCAGCAGAGGTGATGTTAATGCCAAGGCCAGCCAGGCCGGTCAGACAGCTCTCATGCTAGCGGTCAGTCATGGGCGTTTGGATATGGTGCAGGCTCTGCTGGCAGCTGGGGCAGAGGTCAACATCCAGGATGATGAGGGCTCATCTGCACTCATGTGTGCTGGTGAACACGGCCATGCTGACATCGTCAAACTCCTACTTGCCCAGCCGGGCTGTGATGCCACACTGACTGACAATGATGAGAGCACTGCTCTGTCTATAGCTCTGGAGGCCGGACACAAAGATATAGCAATGCTCATCTACGCACATGTCAACTACTCAAAGAGCCAGCCTAGGTCACAGGGTTCTCCTCGAAGCAAGACTCCACCTGCTTCTCGTACCAGCTCTTCTGATTGATATGACATGCTCTATTCAACCAGTAAAACATCCCTTCTGAACTACCTGGTGTTGAATCACACGACGAATATGGCAGATTTAATATTAAAGTGAGCAGGAGTCCTGAAACCGCACTGCACTCACTGCTGTAGGGATAAGCCATATGATCTGCTTCCTTCATTACTGGCTATAATTCTCAAATATTAACAGTGCAGTTTGCAGTATTAAAGAAACATATTTTTAACTTtgactatttattattatgaaagaAAACTGCATGCCATATcacttttaaattttaattttatgagATTATATGCATTTTAGGATACTGTATAGGTgttgtatacacacacatttagcttgatttaattacttttaattacATAATTACTTTTTCCCACGTACAATTTTAAGAAATCTTAATAAAAGGAAATATGTGTAAATGTCATGTGAATATACTCTTAAATAAAAACGTGCTTACACCA
>TCONS_00060592
GGAGCTCCGCCGCTCACCTGCCGTATCGCGTCATGGCGTCAGCAGCAACTCCTCCATACGCACTCACAGAAGAGCATGGTAAAGTTACTGCCAGCACCGTCTGTTTAGGCTGAACGTACATAAGGGGAACCCAAGTTCAAGATAAACAAAACTGATCAGATGTAAACGCTGAGCGAGTGTGTTCGTGTCCATCTCTGCAGTTGTGCTTCGCTCTGTGTATTTACTGCTAAGAAGGGAGAAATTTTATCTTTGGTTTTTGTCAGTCAACAGCTGTCATGACTCAAGAAACGCACTTCCACCCTAATCAACAAGATTGGAATGAGATCACTTCTGATGCTTTCCAGAAAAGCCCATTCAGCGTTAATACACCATATGGGTACCAGCTCGACTTAGACTTTGTTAAGTACGTGGATGATATTGAGCGAAGTGACACCATTCGGCGATTGCGTTTCAACAAACGGCCTGGGGTGGCAAATGCTGCCTCCGAGCCACAACACCCCATAAACCCCACACACCGGATTTCCTCAGAGTCACTGTCCTCAGTGAGCAGTGATGAAGCCAAGAAAACGTCTTCATCTTCTTCTGCTgtcaacagcagaagaccaccacTTCCCCATTCCAAACCTAAAACTTCCAGTCAAAGAGCTGATGTCCCGCAAGACCTAATCACCTGTCAGAGGAATGTAGAAGGGAAGCCCACACCAACCACACAACCACCTACCCCAGCCAAATCCAACCCTGTAGTGGAAAAGACTTTAATGGAAACATGCAGACGTTTGGAACATGAGAAAGGCTCTTTACAGCAAGCACCGCCAGAGCCACAGCCGCGGCGTAGACTGGCCAGTTTTGGTGGTGTGGGATCTAGTGGCACCTTGTCTCCATACACAAGCTGGAGTGCCCTAAATCAAGGTGCTAAGATGACAGTATTAGACCAGCCCAGAGAACGCACCTTGATATTGGGCAGTGCCCTTAAAATCAGCCCCTCGAGCTCTGGCCGAGCATCTCCAGCTAGTGGTGTAAGCCCACTCCATCTGCAGATGGTCAGGGATCAGATGGCAACTGCTTTACAAAGGTTAAAGGATTTGGAAGAGCAGGTAAAGGCCATACCTCTACTACAGGTCAAGATCTCTGTTTTGCAAGAAGAAAAGAGACAACTGGCTGCCTTAGTCAAGAGCCAAGATGAAGATCAAAAATCAGGGTCTAGCATAGACCAAGAATATATCAACAAACCATCAGTGGAGGGTTGGGAGCACAAAACCATGTCTACATTGAAAGATTTCCAACTGCTCAGTGTTGAAATGCAACTGCTTGAAAGGAAGATCCAGGATGCACGTATTGAATCCTCAGCCTTCAAGATGAGGGATCGAGAGTCTGTTGACAGGGGCATTGATGAAGCCTTTTGTAAGGATGGTACCATTGGTGCAAAACTTGAGACTCAGTCAGTTGCTGTTGGCGTTACTGAGACTATGCTAGGGGTGCTATCTGACAAAGACGAGATGCAACAGCAGACCATACAGAATTTAACCTACCAGGTTCAGATACTTGAGGCCGAGCTAAAAGAAGCAATGCTTAAGTCAGAAATGGGTCGGATGAGGAGTGAGCTTCGTGAAGCAGAAGCGAGAAACCGTACTTACAAGAGTTCCACTGCACAACCATTGGTCAAATGCACCGCAACCCAGACTGGGTCTCAAAATCACACTAACCTTTTGACTCCAGCTGTTGGGGGAGAATTAGGAAGGATTTCTGTTGGAATCTCCTGCAAACCCGAGGTTAAGATTGTCTCTTCTGGCCCAGATACACCTATGGTAGATTGGGAAGTACGGAGAAGAGTAGAGCGAAAAGATCAGTGTGTTGGAAGCAAGTGTGCAAAAACACAGAGTCAATGTGTTGGGACAACAGTGTGCATGTGTGATGCCACCACAATTACTTTAGAGACAATGAAGAACAGGAGGAACATTTCCTACCGAACGGTGGGCTGCGGTGACTATATGGTCAATGCGGACCTCAGACCAATCAAATCCTTTGTTTCCCAAGGAACTGTCACTGACCCTATCAGAAGTGTTGACCTGGGTGTAATGGTAATCCCTCAGACTGTGTCGCAGCGTACTAGCACAGCCTTTTGCACCATCTCACGCAGCACCAGTACTTTGCAGGCCTGCGTCTCCGAAGCCAGCACCAACACAAAGCACACACTCACCAGAGAAAGACATACCAACACGGCcaacacagtcaccagatctctgGCAATTGGGGATGGAAAGGTTTGTGACAGAGTGGCTGCTGTTCAAATGCGAACTGTTGGAACCACTGCATACCTAGACGGGTGCACTAGTGCTCCTGATGTCCCAAATGTAAAGACATGTGACATCGGTGTTGGGATGGCAAATATAAATGAGAATATCCTCATCGGACTCCATACACGCAACATTGCATGTGGACCATCGCGTCTCCCGGATCCAGTCAAAACGCGTAGCATCGGTGTAGAAGTGGGAGACGGTAGGATACGTGACCCAGAGGGTCAGATGTTTGTGCAGAACGAGCCTGGTCTTGATCATTACATAGATCGCATGCAGAAATTACTTAAAGAACAGCAGGACCTGTTAACAGACAGTCACACCGGGTCAAAACCTGACCTCATTCTCCAATCCCAGTTCTACTCAGATGAGCAAATCAGAGGTATAGATTTAGTGAGAAGATGCTTTCTGCGTGCCAAACTCTCGAGATTCACCTCAATGGCAGCAAGACCATATCCAATAGAGAACATTCAAAAGAGGGTTTGCCCACAGATCGTGGAGGACTTCCTATTCGCCTGCTGCCAAGTCTCGCCAGACGTTCTCTGCTATGTGGCCAACATGCCTGACCAAAATGGCAACACCGCCCTGCACTACAGCGTGTCTCACTCTAATTTCAGTGTAGTAAAGGTTCTGCTTGCTGCAGGTGTGTGTAATATTGATCATCAGAATAAGGCTGGCTATACTCCCATAATGCTTGCCTCCCTGGCTGCGGTGGAAACTAAAGAAGACATGATAGTGGTTCAAGAACTTTTCAGCAGAGGTGATGTTAATGCCAAGGCCAGCCAGGCCGGTCAGACAGCTCTCATGCTAGCGGTCAGTCATGGGCGTTTGGATATGGTGCAGGCTCTGCTGGCAGCTGGGGCAGAGGTCAACATCCAGGATGATGAGGGCTCATCTGCACTCATGTGTGCTGGTGAACACGGCCATGCTGACATCGTCAAACTCCTACTTGCCCAGCCGGGCTGTGATGCCACACTGACTGACAATGATGAGAGCACTGCTCTGTCTATAGCTCTGGAGGCCGGACACAAAGATATAGCAATGCTCATCTACGCACATGTCAACTACTCAAAGAGCCAGCCTAGGTCACAGGGTTCTCCTCGAAGCAAGACTCCACCTGCTTCTCGTACCAGCTCTTCTGATTGATATGACATGCTCTATTCAACCAGTAAAACATCCCTTCTGAACTACCTGGTGTTGAATCACACGACGAATATGGCAGATTTAATATTAAAGTGAGCAGGAGTCCTGAAACCGCACTGCACTCACTGCTGTAGGGATAAGCCATATGATCTGCTTCCTTCATTACTGGCTATAATTCTCAAATATTAACAGTGCAGTTTGCAGTATTAAAGAAACATATTTTTAACTTtgactatttattattatgaaagaAAACTGCATGCCATATcacttttaaattttaattttatgagATTATATGCATTTTAGGATACTGTATAGGTgttgtatacacacacatttagcttgatttaattacttttaattacATAATTACTTTTTCCCACGTACAATTTTAAGAAATCTTAATAAAAGGAAATATGTGTAAATGTCATGTGAATATACTCTTAAATAAAAACGTGCTTACACCA
>TCONS_00060593
GGAGTAAGACAGGGACAGAGAGAAGAAAGAGAATTTTTtaactttactagatatttatgaAACTGCAATATTACTTTCTGTGAAAATTCAATACTGCAGATTGGAATGAGATCACTTCTGATGCTTTCCAGAAAAGCCCATTCAGCGTTAATACACCATATGGGTACCAGCTCGACTTAGACTTTGTTAAGTACGTGGATGATATTGAGCGAAGTGACACCATTCGGCGATTGCGTTTCAACAAACGGCCTGGGGTGGCAAATGCTGCCTCCGAGCCACAACACCCCATAAACCCCACACACCGGATTTCCTCAGAGTCACTGTCCTCAGTGAGCAGTGATGAAGCCAAGAAAACGTCTTCATCTTCTTCTGCTgtcaacagcagaagaccaccacTTCCCCATTCCAAACCTAAAACTTCCAGTCAAAGAGCTGATGTCCCGCAAGACCTAATCACCTGTCAGAGGAATGTAGAAGGGAAGCCCACACCAACCACACAACCACCTACCCCAGCCAAATCCAACCCTGTAGTGGA
>TCONS_00060594
GGAGCTCCGCCGCTCACCTGCCGTATCGCGTCATGGCGTCAGCAGCAACTCCTCCATACGCACTCACAGAAGAGCATGGTAAAGTTACTGCCAGCACCGTCTGTTTAGGCTGAACGTACATAAGGGGAACCCAAGTTCAAGATAAACAAAACTGATCAGATGTAAACGCTGAGCGAGTGTGTTCGTGTCCATCTCTGCAGTTGTGCTTCGCTCTGTGTATTTACTGCTAAGAAGGGAGAAATTTTATCTTTGGTTTTTGTCAGTCAACAGCTGTCATGACTCAAGAAACGCACTTCCACCCTAATCAACAAGATTGGAATGAGATCACTTCTGATGCTTTCCAGAAAAGCCCATTCAGCGTTAATACACCATATGGGTACCAGCTCGACTTAGACTTTGTTAAGTACGTGG

Function

symbol description
kank1b Predicted to enable oxidoreductase activity. Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in central nervous system; eye; hindbrain; and midbrain. Human ortholog(s) of this gene implicated in spastic quadriplegia. Orthologous to human KANK1 (KN motif and ankyrin repeat domains 1).

GO:

id name namespace
GO:0030837 negative regulation of actin filament polymerization biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-260 Predicted to enable oxidoreductase activity. Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in central nervous system; eye; hindbrain; and midbrain. Human ortholog(s) of this gene implicated in spastic quadriplegia. Orthologous to human KANK1 (KN motif and ankyrin repeat domains 1).

Ensembl:

ensembl_id ENSDARG00000060584

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060591 False 2438 mRNA 0.45 10 33222124 33230794
TCONS_00060592 False 3907 mRNA 0.46 9 33222124 33236637
TCONS_00060593 False 535 processed_transcript 0.46 2 33231864 33232766
TCONS_00060594 True 411 mRNA 0.46 3 33232201 33236637

Neighbor

gene id symbol gene type direction distance location
XLOC_031203 si:dkey-226m8.10 coding downstream 6735 33199998 ~ 33215389 (-)
XLOC_031202 glipr2 coding downstream 182454 33028083 ~ 33039670 (-)
XLOC_031201 TUBB4B coding downstream 200110 33018764 ~ 33022014 (-)
XLOC_031200 NA coding downstream 294205 32922656 ~ 32927919 (-)
XLOC_031199 pole3 coding downstream 331317 32888119 ~ 32890807 (-)
XLOC_031205 prkaa1 coding upstream 1908 33238545 ~ 33255759 (-)
XLOC_031206 ifitm1 coding upstream 21652 33258289 ~ 33259079 (-)
XLOC_031207 kyat1 coding upstream 28205 33264842 ~ 33281156 (-)
XLOC_031208 rpl7a coding upstream 47507 33284144 ~ 33287691 (-)
XLOC_031209 CU019641.3 coding upstream 48889 33285526 ~ 33285597 (-)
XLOC_031198 NA non-coding downstream 336250 32885179 ~ 32885874 (-)
XLOC_031195 NA non-coding downstream 437324 32782667 ~ 32784800 (-)
XLOC_031194 NA non-coding downstream 484966 32560580 ~ 32737158 (-)
XLOC_031193 NA non-coding downstream 685375 32516671 ~ 32536749 (-)
XLOC_031210 NA non-coding upstream 49950 33286587 ~ 33286658 (-)
XLOC_031218 BX296533.1 non-coding upstream 1001270 34237907 ~ 34238023 (-)
XLOC_031221 BX530075.3 non-coding upstream 1597341 34833978 ~ 34834093 (-)
XLOC_031229 NA non-coding upstream 2286772 35523409 ~ 35540980 (-)

Expression


Co-expression Network