XLOC_031213 (si:dkey-34e4.1)


Basic Information

Item Value
gene id XLOC_031213
gene name si:dkey-34e4.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 33537789 ~ 33607062 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060616
GAAGTGGTGCAGCTTTTATTATGCTAAATGTAGTGTTTGAAAGATTTGTCGGTTGTTCCTAAAGCACACGGAACTTTGCTCCATAAGAATTGCATCAGAGGTTGAAGAGAGCAACGCAAATAAAGCATGTCATCAGGACACGAGAAGTGAAGAATTCCGCCATAGCTCCTCTTTTAATAAACTTCTCCTCGCTGAGGCACTTGAGCAACTTGAGTGGAAGCCAGACTTGTATAAACGCAGCTGATGTCTGAGGGCTGAGAGGGGGAAAGAGGCGCCCAACCCATTTCTTTTGTGCTGAAGCGCCTGTGATTTCATTGAGCTTTTCCCGGGCTGCTACTATAATGGGCTCCCTCGCTTTCAGTCGCTCTTGTATCCGCGACTTGTTTTCGGCTGGTTAAACTAGAGCAATCTTCTTAGTTGGCAGTAGTTTTGAAGCTTGGGGTGCTGGAGAAGAAATTCCTCGCCGAGCATCCGGACGGGTCCCAATGAAAATGCACGGGAGAAACAGGTACAACCTGGTGGACGATGTGGCGGATTCGCGGGTCCCGCTTCACAACGAGGAAGCGTATCAACACGGAATACACTTCCAAGCCAAGTATGTTGGCAGTCTAGATGTCCCAAGACCCAACAGTCGCATGGAGATTGTCGCTGCTATGAGAAGAATCAGGtatGAGTTCAAGGCAAAGAGTGTGAAGAAGAAGAAAGTGGCTATCGTGGTCTCAGTTGACGGGGTCAAAGTGGTGCTTCGCAAGAAACCCAAGAGGAAAGAGTGGACGTGGGACGAGAGCAAGATGCTGGTTATGCAAGACCCCATATACAGGATCTTCTATGTATCGCATGATTCTCAGGATCTGAAGATTTTCAGCTACATTGCTCGTGATGGATCCAGCAACTCTTTCAGATGCAACGTGTTCAAGTCCAAAAAGAAGAGTCAGGCCATGCGAATTGTGCGGACGGTCGGTCAGGCGTTTGAGGTTTGCCATAAGCTGAGTCTGCAGCACGCTGAGCTGAATGCAGATGAGCAGCCAGACGGTCCTGCAGACGGCCAGAGCGATCAGTCTGGAGAAGAGCCCAGTCCTGAAGGTCGTCAGCTGACAGGGATGGAGCACAGAACAGATGATGTCACTGGAACTGAGTCTCATCCCACAAAGCTCAGTGAGCAGGCGATGGATGACATTCTTCAAAGCCTGTCCGAGCTCAACATGGTGAAGCCTGGACAAACCATACAGTCTTTACAGGAGGTGGAGGGCGTCTCCCTCTACACTTTATCTCCCAGCAGCCCCTGCTCTCCTTCGCTCACACCGCTGGCCACCAAACACCACCTACAGCTTCTCCAACAACAGCTTCTACAACAGCAGCAGCAAACACAGATCGCCGTTGCACAGGTGCAGCTCTTGAAGGATCAGCTGTCTGCAGAGACAGCGGCTCGCATGGAGGCACAGGCCAGAACACACCAGCTGCTGCTACAGAACCGAGACCTGCTGCAGCACACAGCCCTGCTGGTCAAACACCTCAGCCAACTGGAGATCAGAGCTGCTGGAGACACGCAGAAAGAAGATTCACCATGGAGTAATTTGCCCACTCGTTCTCTGTCTCTGAACCTGAAGAATCTGTACGCTCCTCGCTCAGAACAGCCCATCACCTCCACTCCAGCAGGACCAGCAGAACCTCCTCCCGTTTCCTCCTCCAATGCTGAGTCCTACCTCAATCTGCTGAACCTGCGAGCCGCTCAGACCGTTCCAGATAGTGGCAGACCCGCCAGTGCCAGAAGTGAAGCAAGACTGGATTCAACACAAAGGGAAGTAGCTAAGCTGGAAACTCGGAATTCAACAGCGCTTGATGAGAGGTATTCACAAATCATCCCTAAACTGGACCCGCCACCTCAGCCCCTGAACCGCAAACGTTCAAACAGGACTCTCTCTCCGGGCGTGGAGGCCGAGTACAGAAATTCGACTATAGCCACGGCTGTAAATGGAAATATTCTACCAAATGTCAGCGCTAGCTCCTCATTTCCTGATATCACCCTGTGCTCAGTTTCACCTGGGGATTTCTATTCTCACACCAACGGCACCAGCGTGTCATGTTCAGCAAGTGAAGATTCAGGCGTTCGTTCGGATGACAAATCCCTCATATCCCCCCAATCCAGAGACGATGACCAGAGCTCTGCATTTATCTCCACATCCAGCACATGCAGCAGCTTACCTGAGGATCATCCAGCTGCAGATGGAGGAAGTCCACGGCAATCGACCACACCTGAGCAAACCATCCCGTTCTCCTCGCCGGTCAATGACACCTGCCTTCATATAAGCCTAAGTGAAGATGAGTTTCTGGAGGACGCCAGCTATAATGTCAACACCCCATGCAGGAGTTGA
>TCONS_00060617
CTACTATAATGGGCTCCCTCGCTTTCAGTCGCTCTTGTATCCGCGACTTGTTTTCGGCTGGTTAAACTAGAGCAATCTTCTTAGTTGGCAGTAGTTTTGAAGCTTGGGGTGCTGGAGAAGAAATTCCTCGCCGAGCATCCGGACGGGTCCCAATGAAAATGCACGGGAGAAACAGGTACAACCTGGTGGACGATGTGGCGGATTCGCGGGTCCCGCTTCACAACGAGGAAGCGTATCAACACGGAATACACTTCCAAGCCAATGTTGGCAGTCTAGATGTCCCAAGACCCAACAGTCGCATGGAGATTGTCGCTGCTATGAGAAGAATCAGGtatGAGTTCAAGGCAAAGAGTGTGAAGAAGAAGAAAGTGGCTATCGTGGTCTCAGTTGACGGGGTCAAAGTGGTGCTTCGCAAGAAACCCAAGGCATGTGAGATGAAAGAGTGGACGTGGGACGAGAGCAAGATGCTGGTTATGCAAGACCCCATATACAGGATCTTCTATGTATCGCATGATTCTCAGGATCTGAAGATTTTCAGCTACATTGCTCGTGATGGATCCAGCAACTCTTTCAGATGCAACGTGTTCAAGTCCAAAAAGAAGAGTCAGGCCATGCGAATTGTGCGGACGGTCGGTCAGGCGTTTGAGGTTTGCCATAAGCTGAGTCTGCAGCACGCTGAGCTGAATGCAGATGAGCAGCCAGACGGTCCTGCAGACGGCCAGAGCGATCAGTCTG

Function

symbol description
si:dkey-34e4.1 Predicted to enable nitric-oxide synthase binding activity. Human ortholog(s) of this gene implicated in nephrotic syndrome type 22. Orthologous to human NOS1AP (nitric oxide synthase 1 adaptor protein).

GO:

id name namespace
GO:0050998 nitric-oxide synthase binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-456 Predicted to enable nitric-oxide synthase binding activity. Human ortholog(s) of this gene implicated in nephrotic syndrome type 22. Orthologous to human NOS1AP (nitric oxide synthase 1 adaptor protein).

Ensembl:

ensembl_id ENSDARG00000022085

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060616 False 2372 mRNA 0.51 11 33537789 33607062
TCONS_00060617 True 735 mRNA 0.50 6 33573334 33606729

Neighbor

gene id symbol gene type direction distance location
XLOC_031212 GARNL3 coding downstream 76830 33356425 ~ 33460959 (-)
XLOC_031211 C5H9orf78 coding downstream 239437 33295678 ~ 33298352 (-)
XLOC_031208 rpl7a coding downstream 250098 33284144 ~ 33287691 (-)
XLOC_031210 NA coding downstream 251131 33286587 ~ 33286658 (-)
XLOC_031209 CU019641.3 coding downstream 252192 33285526 ~ 33285597 (-)
XLOC_031214 dab2ipb coding upstream 72497 33679559 ~ 33886495 (-)
XLOC_031215 si:dkeyp-72a4.1 coding upstream 272745 33879807 ~ 33935396 (-)
XLOC_031216 zgc:63972 coding upstream 333153 33940215 ~ 33959868 (-)
XLOC_031217 fibcd1 coding upstream 459529 34066591 ~ 34185497 (-)
XLOC_031218 BX296533.1 coding upstream 630845 34237907 ~ 34238023 (-)
XLOC_031200 NA non-coding downstream 609870 32922656 ~ 32927919 (-)
XLOC_031198 NA non-coding downstream 651915 32885179 ~ 32885874 (-)
XLOC_031195 NA non-coding downstream 752989 32782667 ~ 32784800 (-)
XLOC_031221 BX530075.3 non-coding upstream 1226916 34833978 ~ 34834093 (-)
XLOC_031229 NA non-coding upstream 1916347 35523409 ~ 35540980 (-)
XLOC_031231 BX005476.1 non-coding upstream 2216356 35823418 ~ 35823548 (-)
XLOC_031238 NA non-coding upstream 3214812 36821874 ~ 36829073 (-)

Expression


Co-expression Network