Gene
RNA
| Item | Value |
|---|---|
| gene id | G1214802 |
| gene name | LOC106604697 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 11326385 ~ 11329070 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| matrix metalloproteinase-25-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1387247 | True | 500 | lncRNA | 0.57 | 3 | 11326385 | 11329070 |
11,326,000
11,327,000
11,328,000
11,329,000
11,330,000
11,331,000
11,332,000
11,333,000
11,334,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488796 | LOC106611772 | coding | downstream | 23431 | 11299273 ~ 11302954 (-) |
| LOC110488795 | LOC106604699 | coding | downstream | 48698 | 11239258 ~ 11277687 (-) |
| LOC118938748 | NA | coding | downstream | 96625 | 11223392 ~ 11229760 (-) |
| LOC110488794 | rap2c | coding | downstream | 224829 | 11097741 ~ 11101556 (-) |
| LOC110487731 | LOC106604701 | coding | downstream | 230491 | 11093419 ~ 11095894 (-) |
| LOC110488799 | LOC102314576 | coding | upstream | 32434 | 11361504 ~ 11364211 (-) |
| mgst2 | mgst2 | coding | upstream | 35531 | 11364601 ~ 11365854 (-) |
| LOC110488801 | rab33b | coding | upstream | 60985 | 11390055 ~ 11393328 (-) |
| LOC110488803 | LOC106604691 | coding | upstream | 69805 | 11398875 ~ 11413521 (-) |
| LOC118938776 | NA | coding | upstream | 73586 | 11402656 ~ 11402791 (-) |
| G1214762 | NA | non-coding | downstream | 66738 | 11258718 ~ 11259647 (-) |
| G1214761 | NA | non-coding | downstream | 67827 | 11256323 ~ 11258558 (-) |
| G1214765 | NA | non-coding | downstream | 82866 | 11243207 ~ 11243519 (-) |
| G1214572 | NA | non-coding | downstream | 99502 | 11226637 ~ 11226883 (-) |
| G1214571 | NA | non-coding | downstream | 99957 | 11226207 ~ 11226428 (-) |
| G1214804 | NA | non-coding | upstream | 842 | 11329912 ~ 11332552 (-) |
| G1214828 | LOC100194703 | non-coding | upstream | 44252 | 11373322 ~ 11373645 (-) |
| G1214819 | NA | non-coding | upstream | 44783 | 11373853 ~ 11374246 (-) |
| G1214859 | NA | non-coding | upstream | 114608 | 11443678 ~ 11443947 (-) |
| LOC110488774 | LOC106604718 | other | downstream | 476802 | 10844755 ~ 10849852 (-) |
| LOC110488761 | NA | other | downstream | 1055515 | 10192267 ~ 10270937 (-) |
| LOC110488750 | LOC106604745 | other | downstream | 1816878 | 9504194 ~ 9510958 (-) |
| LOC110488746 | LOC106604746 | other | downstream | 1879388 | 9441509 ~ 9475071 (-) |
| G1212484 | NA | other | downstream | 1946255 | 9379550 ~ 9380130 (-) |
| G1214997 | NA | other | upstream | 245737 | 11574807 ~ 11575707 (-) |
| G1215349 | NA | other | upstream | 564952 | 11894022 ~ 11896801 (-) |
| G1215447 | NA | other | upstream | 635423 | 11964493 ~ 11976777 (-) |
