XLOC_031220 (arhgef28a)


Basic Information

Item Value
gene id XLOC_031220
gene name arhgef28a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 34827614 ~ 34964830 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060633
GATTGAGGAAGAAGAATGGGATAAATATATCATCCCTTCCAAAACAGAGTCAGAAAAGTACAAAGTCAGCCGCACATTCAGCTTCATAAAGAGCCGAATGTATAGCACTCGCAACAAGAACAAGGGGAAAGGAAAAGAGAAAGAGACCAAAGACAAGCAGGTCAACGGACACCAGTTCACAGCGGGATCTGTCCTGGGGTCGACACTCTGTGAGATCTGCAGCAAGCCAGCTTCAGGGAAAGAGGTTGTCCATTGCACACACTGTGCAGTGAGTGTCCATAAGGGCTGTAAGGACTCATCTACGCCATGCCTGAAGGTAGACTTTTTTTTCCACTCTAAAACAACATTTGAGCCTGATAGATTGCCTAGGTTTAATATTTAAACACAGATAGATACACGTTTGCCCATGTTTGGTCAGACACAAAGTGCAGAGTATTTTAGATGAGCCCCATTTTTACAATATACAATTCTGGCAATCGGTCTATTAAACTATTAATAGTATATTAAAAACACTTTCCTTTACAGAAACCTCAAGACAAATATTCAGTGATGACAGTAAAAAGCAAGACAGCCTCTCTTCCTCAAAATTTTATTGTGCGTGAGAGTTCATCGTCGTCCCTTCAGATCTCTACCTCTGCTTCTCTCCCTGTGATGACATCACGAGACTCGGCTCCTCTTCCTTGTCCTCTGTCCAGAAGTGTGCCCTTAACCACTGAAAGGCTTAGCGAGAGCCCAGAAGCTGATAGTGATTCTAATCTTTGGAGGAACCACATCCAATCAGAGGAGCTTCTCCAAACCATGGAGTCCTCAACATCCACAGACTCGTCCATCATTGAAGACTCGGTTGATTCCCCTTTACAGATTGAGCTGCTGATGAATGCTGTAGATTTGGAGGCAGAGTCATGGAGTTTAGCTGTGGAGGCCCAGTTCTGTAGGATGCAAGAAAAACGCATCATCAAGAGACAGGATGTGATTTACGAGTTCATGCAGACCGAGCTCCATCACGTGCAGACACTCATGGTGATGGCAGAGGTCTTCAGAAGGGGAATGCGGGATGAAGTGGGTCTGGACGCAGAGACCATTGGCCGGATTTTTCCTTGCTTAGATGAGCTACTCCAACTCCATCGTGATTTTCTGACAGCAATGAGGGAACGAAGGCAAAGCTGCGTCCAGAACAACAGCAGCAAAAACTTTCTCATCCACCGTGTGGGTGATATTTTTCTGCAACAGTTCTCCCAGGAGAACGCAGAGAAGATGAAGCAGGTGTATGGAGAGTTTTGCAGTCATCACACAGAAGCAGTCAGTTACTTCAAAGAGCTTCAGCAGCAGAACAAGAGATTTCAGCTCTTCATCAAACAACAGAGTAGTAACTCGCTGGTGAAGAGGCGAGAGATCCCAGAATGTATTTTGTTAGTGACGCAGCGAATTACAAAGTACCCTGTCCTCCTAGAGAGAATACTCCAGTACACAGACGaggGCACAGAAGAGCACTCTGACCTCTCTCGAGCTCTAGTCCTGATCCGAGAGCTGATCTCCGCTGTGGACCAATATGTGAGTCAGTATGAGCAGAACCAGAAGCTGAGTGAAGTCTTGGGCCGCATGGAGAACAAGTGCTCTACCAAACTGAAGACCGGCTGCACTTTCCGCAAGCAGGACATCACCAGCGGCAGGAATCTGCTGCACCAGGGCCCGCTGCTCTGGAAGACAGCCACTGGAAGACTGAAAGATGTTCTGGCATTTTTGCTGTCTGATTCACTGGTGTTCCTTCAGGAGAAAGATCAGAAATACATTTTTGCTACTGTGGACCAGAAGCCTCCAGTGATCTCTTTGCAGAAACTAATTGTGCGTGAGGTGGCCAATGAAGAGAGAGGCATGTTTCTGATCAGTGCATCTTCAGCCGGGCCTGAGATGTACGAGGTGCATGCAGCCTCTAAAGATGAACGCAACGCCTGGATGAGACTCATCAGAGAGGCCGTGGAGAATTGCCCTGAAGAGGAGGATGAAACTACAAGTGAGTCAGAAGAGGAAAGGAGAGTCACAGAAGCAAAGGTCCAAAAGATCCACCGGCTGCAAGAGACGCTGTGTGGCCATGATCACCTCATCTGTTCCAATCTGGAGGAGAAGCTGCACATCTATGCCGAGCTGTCAGTGATGGCAGGCCAGCGAGAGGCAGGACCAGAGCCCAGGCTGCTGGTACGACCCAGCACTGAAGACGTTCCCCAGGCTGGAGTACTACTCAGCGCCGCTCTCAGAGAGGCGGAGAGCCTAAGAGCAGCTCTCTCCTCTCATTGTGCTTCCACTCCTCCCGTCCCGTCCGGTCCAGAAGATCTAAACAAACCTGAACCCTGCACTCCTCCATCTCCTCTGCCTCCTGAAAGTCCACTGACAGACCCCATCCAGAGTGAGGAGGAGGAGTGGAGAACTGAGGAAAGCTCAGAAGCACAGACCTTTAATCACAACTCGGACTCTGACCACAATCTACAGCTGAAGgtGAGTCAGAGTGTGCAGAGCTTGACTCAGCTGCTGTACAGTCTACAGGCTGCAGTTACCATCCAAGACAGTTGCTATGAAGTGCAGAAGCTTCTTCTCCTGCTGATGTCAAGCCCCGCCCCTAACCAACAGTCCCGCCCACTATCCATCACCCGCAGCGGGCAGGCTCTGCATGAGCAGGAGCGCCAGCGGGAGGCCGAGCGCCGCCGGGAAGAGCTGGCGGATGTGGCTCGTCTGCGGGGAGCCCTGGTACGAGAGCGCCAGCAGTGGGAGAGGGAGTGCCAGGCGCGGCAGCTTCAGCACTCAGAACTGGAGACCACGCTTGAGCAGAGGGAGCTCTTGTGCCACCTAGAGGAGCGGAGGCTGCAGAGCGAGCGGCAGGAGCTCCAGGAGCAGCTGCAGGAATACCAACAGAGTCTGGAGAGGCTCAGAGAAGGCCAGAGGAATGTGGAGAAGGAGAAGGAGAAACTGGAGACTCAGAAGATGCTGCTGGAGGGCTTGAAGCACGGGTGCCAGCAGAACCTTCCAGCTATGGTCATACCACTGGACGGACAGCAGACACAGAATCACCTGGGCATTCAGGACGAGCATGGCTCTATTTTTGTCAATGAGGCAGCGTTCATATCTTCTTCTGTAAATAACAGGCACCTCCATCTTCAGCATCATCCACAGCATCATCACCAGACTGTCCATGTGCACTCAGGATCTATAGGATACTCAGATTCTCCCAGCGCTCAGAACAGTCTTAATTCACTGCTAGCCCGATCCAACCACAGACCCAGCTCTGCTGGAGCATCCGACCACAGCTGGACGTCTCTGAGGAGTCTGACAGAGAGTGCAAACAACAATGTGGGTCAGATCAGCCATGTTGAAGAGTCTTGGTCAGCAGGGGTAACGGGAGCGGGACTCCATCAAACTGATGTCCTGCTCGTCAGCCAGCCCTTCCTAAGCATGGAGACAGAGAACAGAGATACTGATGGAGAGGAGACCATCGTGTATCTCTGAAATCAACAAACAAGCTTCACTCCCTGTTCAAACAAACCGTTTGCTCTTTGATCTGCAGTTTGAGGATCTGATCCCGCTTTTTTTCATTGGATTTTTGTCTTCTTCAATCCGAGCGTACTTTTGGCCTTCAGTGACATTCTCCAGACTTCATCATAGCACTTTCTTTTGTCCGTGTTTGAGATGGGGCTTGAGTTTTGTTTTATAGCCCGGAGCCTCCAGTGACAGAATCAGTTCAGGCAGTTTCAGCACACGTTTagtcacatacacacaaaatacaAATCCCCCACCCACTTTGCTGCAGTGTATTTTCCTCCAACTGTCCATGTCATTTTACATCAGCACATAAAAACACTGACCCTTTCTTACAGGAGCTAAATGACAGCTTGGTTTAAAGAAGCATTCGCCGCCTACTGTGTGAGTCAGGgttatgtatgcatgtgtgtatgtgtgagtgtgtgttaaaATAAAGAATCACATTTTCACCTTTTTCAAATTCACTTTCTCACATTTAATAACTGCTTTCAAATGTCTGTAAGGAAATGAATGTGGAAAATGTGTCCTGCCTTGCTCTTTCGAGAGCGTTCGGTTCTTTGGTGCTCGTAAGCTGTTGTCTATAAAGTCAGATGTGCAGTGATGGCTTGAAAAGTcagattaaagggacagttcacctaaaactgaaatgtcatcatttactcacactatttccaaacctgtttaacttttgtttttctgattaacacaaaagaaagatattttgaataatgccgGAAACCtttatccattgacttccatagtgtttgttttttctactatggaagtaaatggttacaggttttcaactttcttaaaaatatcttattttgtgttcatcagaataaTGAAACATTTCAAGATTTAAATTcacttgaaggagagtaaatagtgagtacattttcagttttgggtgaactatccctttaaattcatCATTCAAATTAATGTTGATACTTTAGGTCAGTGTGTTGCCATATCAGCTTGAAGTCTTtatgcattatgttttttttaaacgtgGAGCAACATCATCATCACTTTTTGctcttattaaaaaaacataaattaaggCCTGCTGTCATTTTAGTCATACTTAAAAGAAAATTCGAGCCATGAGTGTTATAAAAAAGACTAAGGACCAGTATGAGGAGTTAATATGTTACTTGAGTTAAACCGACAAGAATTTAATGTGTatttactgacttttttttttttttttttgcaatggctTATCATactgtgtgttttgtttcttttgttgcaTAGACTTTAtttattgttgacatttttaaggAATAATTTGTATGTACATAGAGCATGTTTTGTATAATTGTATGTAGACCGGTGTATCAGATGTTATAAATGTAGTAAATGTTCATACATcagcttttgtgttttttttttttctttttggaactacagtgctcagcataattgagtacaccccatttaaaaaaatatatatatatatatatttgtatctatttctcagtgaatataggcaatgtattttggtgcatttaaacaaaactgatttattgaacagatatatttattaaaaatatattttagtcaccaaacatatttaagaattgaaagataatacaattaaattcaagctaaatattgtgggaaaaaaaaaacaatttacaaaattaCATCTaagttttttagttgttttttttttttttttttttgctttacttgatttttcctcttttctaaatttgtatttaatgtttttctaaaacatataaatttgggtgtattaGTTTGTGaactgttattgtaagttatttaagACTTatcaaatgtatatgcacaaatttaatattgtatagcttcctattaaaaatatgaattaagaaaaatgatttgtgaggggtgtacttatatatgctgagcactgtaaattaaATTATGCAAATTCTGATTTCAAGTTGACTTAATTTAATCTAACTGGAGCTCATTATAGTCACGTTTTCCTTTTTACAGCAACAGCTTATGTCATATAAATGACATAAACCCAGACGGAATATATCAGACTGTAATTACAATTGTAAAAATGTACTTTCCATACATTTACATAATGTTAGAACCAACTGATTAATAATCCAGAGTACAGTCTTTTAGTAgcctttaaaacatttattattaaggcACACATGCTGCTTGGCAAAGAAAAAATGTCATGCAAATGTGTTTTTGGTATTTTAATATGCAATTGACTCTCCAAAATGGGGGGAAAGGCTTTACTGTAGATGCTGTACTTATACTCTGACTAaggttgatttatttttattttgacttggGCAAAACATCAATTTTGTTTTCTCCACTCTCTTTCCCTGTCTATTATTTAGGGACCTCTAAAGGTTATTTGCACACACAGCTACAGTAGCAACTAACAAAGTCAATCTACAGCAGGGCTGAGTAATGTCTGTGGGTGGGAACAGTAGCCAACCTTACAAAACACCTCCCCATGGCACAGTAATGACTTTAGGAGGACTTCCACTGTAAACCTGTCACCCAAGCTAATAAATAACAGCCATTACCAGCGTCCCAC
>TCONS_00060634
GGGCCATCATCATCATACGCACACGGCACTGAAGAGAGCGAACACCGGTGGCGCATCCACAACCCCTGTGACCGTTCAAAACACTCGGCTTTGTACAAGTGCAAGTCACGCATACGGATGTATTGACCTTCAATCAGTCAGGATACTTTGTGCAAACAACCTGAAGGCTTTACATTGAGAAGTTGAAGAAAATACCTTCGTATGGAGTGAGGTGCTGCTGCTGTAATGGAGCTCAGCAGGGGAGAGGTGCCACTTTATgGTCAGGTGGAGGTCTGCGTGAAGCTGCCGCTGTCTGAGTTTGTTCAGGAGGAAACGGACTACTATGTGCTGCTTGTGGGCTCTTCCCTTCACCATGTAACTGCAGCTCATAGGACTGAGGATCACAGCTCCATTAGGTTCACTGTACCTGGTCACATTGTTCCAGAAAAGGTGTCCGTGGAGGTCTACAGCTGTACAAAGGAGAGCAAAAGTCCCATCAGCCCCTTCTGCCATTCAGAAAAGCTCTCTGTGGAGTACATTTTAGATGAGGTACAAGAAGTGGCAGAGCAGCTGATGAACTTTGAAACCTTGACATCCAGCAGCCATCAGGACATTCTAAAGAAATTATacccaaagaaaaaggttttcTCTGAGAAAAACCATGTAGAACAAACTGCCCAGCATGGGACAGATGGTGTTTGTGATCCACATGGGGGACTGCTTCAGTTGGAAAGCCTTGCAGAGACAGAACAAGGGTTCAATGTTTGCGAACAGGGGAATTTAAGCCAGAGTGAAGTTTCAGGAACGGAGGAGTTTGATCCAGAGCAACACAGTTCTGTTGATGAAAAAGTCACACAGGCCTTGGCCAACTTGCACTTTTTGGGATGGGATGGCCAGGCTGGACAGGAGAACCAAGTTCTTCTTCCCAGGGAAACTCCTCTCCATGTGGCCATGCGTTTAGGCTTCCCCCACCTCAGTCACTTCCTCCTCCGAGAGTTTAATGGTCAGATGATGGTTTCCATTGCCAATGAGGAAGGACATACTCCTGTAGCACTTGCTGAGAAACATGGAGATCCTGTGCTCATCACTGCTTTAACACATGGCAGCGCACTGAGGCCAGTATGGATGTGTCAGATATGGACTGACTGCTCTCAACAGCTCAGAATCTGCCCCGTCACCGACTCCATCAGTCTGACTGTCAGACACCAGACTCTGATAAATGTACAAAACAGCATCCAGCTATACAGAGAGAAGAGCAAAGAGCCGGACATACTCACACGGGTGCGGCATCTGAGTGAGCTGTCTGAGGGGAGCGTGCACAGATCTGATGAATGTGATGCCGACCTGAACAACTCTCTCAAAATCGAGGACCAGACATTGGTTGATAGTGTCTTTGAAGAACAGCTTGTGCTCTGTCTGGATGAGGAGGATGAAGATCTAAGCGTGTTTAATTCAGAGAAGCAGTTTTCGTCTCCGGGCTCCTGCACTCCGTTTCACCTTCATTCCTCAGCCGCTGCAGCCGTCAGGCTCACTGCCATGCTCAAAGGCTCCACTAAGGACAGTGAGCTGAATATGAAGTACGCCGTTCCAGGTGCCACAGAGGACAGCTCTGGGACCGATAGTGGCATGTGGCGGATGTCAGATACGGGGGTCTCATCACCAGGGACAATAGATATATCTCCAACTGTTAAAGATGATGAAGGGCAGAGAGGACGGTACCCCGCCTCTCGTTCTTTCTCTCCCACCTCTCCAGCAGGACTGATGCTGGATAGATTCATGCGGGCCACGAGAACCACTGAACTGACCTACAACAGCTCAAGCTCACCTACAGAGTCATGTGACCTCAGAAGTCCAATCCTCTCTCTAAGCCCGAGTCTGGTTGCCTTGGAAATGGACAGCGAGGAGGATGACGATGATGACATTTTAATGAAGAAGCCCCTCCCACAACTGCAACCGGATTCCAAAGACAGCACAGATGAGCAGGTTATGTCCAGCCCCGCACCTGTACTCATCTGCACGCGCTCTCACTCTGCCTCCTCTGCCTGTAACCCCGCCCCTGCAAAGGATGTTGAGCAGGGTGTCCGACTCCGATCCTATTCCTACACCTCCCCCAAAATCAGCCTTCTGCCTCCACGTTTCAGCCGAGACGCCCATCCTCCACCCGCCGACCTCAGCCAGGAGCACCGCTCTTCCAGCACATCAGAACAGCCTCAAGAGAAAAGGATTGAGGAAGAAGAATGGGATAAATATATCATCCCTTCCAAAACAGAGTCAGAAAAGTACAAAGTCAGCCGCACATTCAGCTTCATAAAGAGCCGAATGTATAGCACTCGCAACAAGAACAAGGGGAAAGGAAAAGAGAAAGAGACCAAAGACAAGCAGGTCAACGGACACCAGTTCACAGCGGGATCTGTCCTGGGGTCGACACTCTGTGAGATCTGCAGCAAGCCAGCTTCAGGGAAAGAGGTTGTCCATTGCACACACTGTGCAGTGAGTGTCCATAAGGGCTGTAAGGACTCATCTACGCCATGCCTGAAGAAACCTCAAGACAAATATTCAGTGATGACAGTAAAAAGCAAGACAGCCTCTCTTCCTCAAAATTTTATTGTGCGTGAGAGTTCATCGTCGTCCCTTCAGATCTCTACCTCTGCTTCTCTCCCTGTGATGACATCACGAGACTCGGCTCCTCTTCCTTGTCCTCTGTCCAGAAGTGTGCCCTTAACCACTGAAAGGCTTAGCGAGAGCCCAGAAGCTGATAGTGATTCTAATCTTTGGAGGAACCACATCCAATCAGAGGAGCTTCTCCAAACCATGGAGTCCTCAACATCCACAGACTCGTCCATCATTGAAGACTCGGTTGATTCCCCTTTACAGATTGAGCTGCTGATGAATGCTGTAGATTTGGAGGCAGAGTCATGGAGTTTAGCTGTGGAGGCCCAGTTCTGTAGGATGCAAGAAAAACGCATCATCAAGAGACAGGATGTGATTTACGAGTTCATGCAGACCGAGCTCCATCACGTGCAGACACTCATGGTGATGGCAGAGGTCTTCAGAAGGGGAATGCGGGATGAAGTGGGTCTGGACGCAGAGACCATTGGCCGGATTTTTCCTTGCTTAGATGAGCTACTCCAACTCCATCGTGATTTTCTGACAGCAATGAGGGAACGAAGGCAAAGCTGCGTCCAGAACAACAGCAGCAAAAACTTTCTCATCCACCGTGTGGGTGATATTTTTCTGCAACAGTTCTCCCAGGAGAACGCAGAGAAGATGAAGCAGGTGTATGGAGAGTTTTGCAGTCATCACACAGAAGCAGTCAGTTACTTCAAAGAGCTTCAGCAGCAGAACAAGAGATTTCAGCTCTTCATCAAACAACAGAGTAGTAACTCGCTGGTGAAGAGGCGAGAGATCCCAGAATGTATTTTGTTAGTGACGCAGCGAATTACAAAGTACCCTGTCCTCCTAGAGAGAATACTCCAGTACACAGACGaggGCACAGAAGAGCACTCTGACCTCTCTCGAGCTCTAGTCCTGATCCGAGAGCTGATCTCCGCTGTGGACCAATATGTGAGTCAGTATGAGCAGAACCAGAAGCTGAGTGAAGTCTTGGGCCGCATGGAGAACAAGTGCTCTACCAAACTGAAGACCGGCTGCACTTTCCGCAAGCAGGACATCACCAGCGGCAGGAATCTGCTGCACCAGGGCCCGCTGCTCTGGAAGACAGCCACTGGAAGACTGAAAGATGTTCTGGCATTTTTGCTGTCTGATTCACTGGTGTTCCTTCAGGAGAAAGATCAGAAATACATTTTTGCTACTGTGGACCAGAAGCCTCCAGTGATCTCTTTGCAGAAACTAATTGTGCGTGAGGTGGCCAATGAAGAGAGAGGCATGTTTCTGATCAGTGCATCTTCAGCCGGGCCTGAGATGTACGAGGTGCATGCAGCCTCTAAAGATGAACGCAACGCCTGGATGAGACTCATCAGAGAGGCCGTGGAGAATTGCCCTGAAGAGGAGGATGAAACTACAAGTGAGTCAGAAGAGGAAAGGAGAGTCACAGAAGCAAAGGTCCAAAAGATCCACCGGCTGCAAGAGACGCTGTGTGGCCATGATCACCTCATCTGTTCCAATCTGGAGGAGAAGCTGCACATCTATGCCGAGCTGTCAGTGATGGCAGGCCAGCGAGAGGCAGGACCAGAGCCCAGGCTGCTGGTACGACCCAGCACTGAAGACGTTCCCCAGGCTGGAGTACTACTCAGCGCCGCTCTCAGAGAGGCGGAGAGCCTAAGAGCAGCTCTCTCCTCTCATTGTGCTTCCACTCCTCCCGTCCCGTCCGGTCCAGAAGATCTAAACAAACCTGAACCCTGCACTCCTCCATCTCCTCTGCCTCCTGAAAGTCCACTGACAGACCCCATCCAGAGTGAGGAGGAGGAGTGGAGAACTGAGGAAAGCTCAGAAGCACAGACCTTTAATCACAACTCGGACTCTGACCACAATCTACAGCTGAAGgtGAGTCAGAGTGTGCAGAGCTTGACTCAGCTGCTGTACAGTCTACAGGCTGCAGTTACCATCCAAGACAGTTGCTATGAAGTGCAGAAGCTTCTTCTCCTGCTGATGTCAAGCCCCGCCCCTAACCAACAGTCCCGCCCACTATCCATCACCCGCAGCGGGCAGGCTCTGCATGAGCAGGAGCGCCAGCGGGAGGCCGAGCGCCGCCGGGAAGAGCTGGCGGATGTGGCTCGTCTGCGGGGAGCCCTGGTACGAGAGCGCCAGCAGTGGGAGAGGGAGTGCCAGGCGCGGCAGCTTCAGCACTCAGAACTGGAGACCACGCTTGAGCAGAGGGAGCTCTTGTGCCACCTAGAGGAGCGGAGGCTGCAGAGCGAGCGGCAGGAGCTCCAGGAGCAGCTGCAGGAATACCAACAGAGTCTGGAGAGGCTCAGAGAAGGCCAGAGGAATGTGGAGAAGGAGAAGGAGAAACTGGAGACTCAGAAGATGCTGCTGGAGGGCTTGAAGCACGGGTGCCAGCAGAACCTTCCAGCTATGGTCATACCACTGGACGGACAGCAGACACAGAATCACCTGGGCATTCAGGACGAGCATGGCTCTATTTTTGTCAATGAGGCAGCGTTCATATCTTCTTCTGTAAATAACAGGCACCTCCATCTTCAGCATCATCCACAGCATCATCACCAGACTGTCCATGTGCACTCAGGATCTATAGGATACTCAGATTCTCCCAGCGCTCAGAACAGTCTTAATTCACTGCTAGCCCGATCCAACCACAGACCCAGCTCTGCTGGAGCATCCGACCACAGCTGGACGTCTCTGAGGAGTCTGACAGAGAGTGCAAACAACAATGTGGGTCAGATCAGCCATGTTGAAGAGTCTTGGTCAGCAGGGGTAACGGGAGCGGGACTCCATCAAACTGATGTCCTGCTCGTCAGCCAGCCCTTCCTAAGCATGGAGACAGAGAACAGAGATACTGATGGAGAGGAGACCATCGTGTATCTCTGAAATCAACAAACAAGCTTCACTCCCTGTTCAAACAAACCGTTTGCTCTTTGATCTGCAGTTTGAGGATCTGATCCCGCTTTTTTTCATTGGATTTTTGTCTTCTTCAATCCGAGCGTACTTTTGGCCTTCAGTGACATTCTCCAGACTTCATCATAGCACTTTCTTTTGTCCGTGTTTGAGATGGGGCTTGAGTTTTGTTTTATAGCCCGGAGCCTCCAGTGACAGAATCAGTTCAGGCAGTTTCAGCACACGTTTagtcacatacacacaaaatacaAATCCCCCACCCACTTTGCTGCAGTGTATTTTCCTCCAACTGTCCATGTCATTTTACATCAGCACATAAAAACACTGACCCTTTCTTACAGGAGCTAAATGACAGCTTGGTTTAAAGAAGCATTCGCCGCCTACTGTGTGAGTCAGGgttatgtatgcatgtgtgtatgtgtgagtgtgtgttaaaATAAAGAATCACATTTTCACCTTTTTCAAATTCACTTTCTCACATTTAATAACTGCTTTCAAATGTCTGTAAGGAAATGAATGTGGAAAATGTGTCCTGCCTTGCTCTTTCGAGAGCGTTCGGTTCTTTGGTGCTCGTAAGCTGTTGTCTATAAAGTCAGATGTGCAGTGATGGCTTGAAAAGTcagattaaagggacagttcacctaaaactgaaatgtcatcatttactcacactatttccaaacctg
>TCONS_00060635
ATGTCTCAGATaaatatcccggacgagcccccatttcatgGTCAGGTGGAGGTCTGCGTGAAGCTGCCGCTGTCTGAGTTTGTTCAGGAGGAAACGGACTACTATGTGCTGCTTGTGGGCTCTTCCCTTCACCATGTAACTGCAGCTCATAGGACTGAGGATCACAGCTCCATTAGGTTCACTGTACCTGGTCACATTGTTCCAGAAAAGGTGTCCGTGGAGGTCTACAGCTGTACAAAGGAGAGCAAAAGTCCCATCAGCCCCTTCTGCCATTCAGAAAAGCTCTCTGTGGAGTACATTTTAGATGAGGTACAAGAAGTGGCAGAGCAGCTGATGAACTTTGAAACCTTGACATCCAGCAGCCATCAGGACATTCTAAAGAAATTATacccaaagaaaaaggttttcTCTGAGAAAAACCATGTAGAACAAACTGCCCAGCATGGGACAGATGGTGTTTGTGATCCACATGGGGGACTGCTTCAGTTGGAAAGCCTTGCAGAGACAGAACAAGGGTTCAATAGTGAAGTTTCAGGAACGGAGGAGTTTGATCCAGAGCAACACAGTTCTGTTGATGAAAAAGTCACACAGGCCTTGGCCAACTTGCACTTTTTGGGATGGGATGGCCAGGCTGGACAGGAGAACCAAGTTCTTCTTCCCAGGGAAACTCCTCTCCATGTGGCCATGCGTTTAGGCTTCCCCCACCTCAGTCACTTCCTCCTCCGAGAGTTTAATGGTCAGATGATGGTTTCCATTGCCAATGAGGAAGGACATACTCCTGTAGCACTTGCTGAGAAACATGGAGATCCTGTGCTCATCACTGCTTTAACACATGGCAGCGCACTGAGGCCAGTATGGATGTGTCAGATATGGACTGACTGCTCTCAACAGCTCAGAATCTGCCCCGTCACCGACTCCATCAGTCTGACTGTCAGACACCAGACTCTGATAAATGTACAAAACAGCATCCAGCTATACAGAGAGAAGAGCAAAGAGCCGGACATACTCACACGGGTGAGTCTGTGTTTACATGCTCATTTTTCAAGAAAACTCTTTCTTTGTTTCCTTTTGTTCATGTCTTTTGTTTTGACAGAGAAGCAGTTTTCGTCTCCGGGCTCCTGCACTCCGTTTCACCTTCATTCCTCAGCCGCTGCAGCCGTCAGGCTCACTGCCATGCTCAAAGGCTCCACTAAGGTCAGACGCCACACATATCGCAATACGGGGGTCTCATCACCAGGGACAATAGATATATCTCCAACTGTTAAAGATGATGAAGGGCAGAGAGGACGGTACCCCGCCTCTCGTTCTTTCTCTCCCACCTCTCCAGCAGGACTGATGCTGGATAGATTCATGCGGGCCACGAGAACCACTGAACTGACCTACAACAGCTCAAGCTCACCTACAGAGTCATGTGACCTCAGCCCGAGTCTGGTTGCCTTGGAAATGGACAGCGAGGAGGATGACGATGATGACATTTTAATGAAGAAGCCCCTCCCACAACTGCAACCGGATTCCAAAGACAGCACAGATGAGCAGGTTATGTCCAGCCCCGCACCTGTACTCATCTGCACGCGCTCTCACTCTGCCTCCTCTGCCTGTAACCCCGCCCCTGCAAAGGATGTTGAGCAGGGTGTCCGACTCCGATCCTATTCCTACACCTCCCCCAAAATCAGCCTTCTGCCTCCACGTTTCAGCCGAGACGCCCATCCTCCACCCGCCGACCTCAGCCAGGAGCACCGCTCTTCCAGCACATCAGAACAGCCTCAAGAGAAAAGGGAGTTAAGGTTTCGCAGGCGAGCTCAGTCGGCTGATGATGAAAGCAGTGCAGAGCTGGCCGACTCGCTCCAACATCTCACGCTCTCAGAGTTCCTCAAAGAGATTGAGGAAGAAGAATGGGATAAATATATCATCCCTTCCAAAACAGAGTCAGAAAAGTACAAAGTCAGCCGCACATTCAGCTTCATAAAGAGCCGAATGTATAGCACTCGCAACAAGAACAAGGGGAAAGGAAAAGAGAAAGAGACCAAAGACAAGCAGGTCAACGGACACCAGTTCACAGCGGGATCTGTCCTGGGGTCGACACTCTGTGAGATCTGCAGCAAGCCAGCTTCAGGGAAAGAGGTTGTCCATTGCACACGTAAGTTACCAACAAAATTCAGAAATAATCAAACTGCAGTTTTACTAATCTTAAAAGATGCAATGGGTTTATGGCTTAGCGAGAGCCCAGAAGCTGATAGTGATTCTAATCTTTGGAGGAACCACATCCAATCAGAGGAGCTTCTCCAAACCATGGAGTCCTCAACATCCACAGACTCGTCCATCATTGAAGACTCGGTTGATTCCCCTTTACAGATTGAGCTGCTGATGAATGCTGTAGATTTGGAGGCAGAGTCATGGAGTTTAGCTGTGGAGGCCCAGTTCTGTAGGATGCAAGAAAAACGCATCATCAAGAGACAGGATGTGATTTACGAGTTCATGCAGACCGAGCTCCATCACGTGCAGACACTCATGGTGATGGCAGAGGTCTTCAGAAGGGGAATGCGGGATGAAGTGGGTCTGGACGCAGAGACCATTGGCCGGATTTTTCCTTGCTTAGATGAGCTACTCCAACTCCATCGTGATTTTCTGACAGCAATGAGGGAACGAAGGCAAAGCTGCGTCCAGAACAACAGCAGCAAAAACTTTCTCATCCACCGTGTGGGTGATATTTTTCTGCAACAGTTCTCCCAGGAGAACGCAGAGAAGATGAAGCAGGTGTATGGAGAGTTTTGCAGTCATCACACAGAAGCAGTCAGTTACTTCAAAGAGCTTCAGCAGCAGAACAAGAGATTTCAGCTCTTCATCAAACAACAGAGTAGTAACTCGCTGGTGAAGAGGCGAGAGATCCCAGAATGTATTTTGTTAGTGACGCAGCGAATTACAAAGTACCCTGTCCTCCTAGAGAGAATACTCCAGTACACAGACGaggGCACAGAAGAGCACTCTGACCTCTCTCGAGCTCTAGTCCTGATCCGAGAGCTGATCTCCGCTGTGGACCAATATGTGAGTCAGTATGAGCAGAACCAGAAGCTGAGTGAAGTCTTGGGCCGCATGGAGAACAAGTGCTCTACCAAACTGAAGACCGGCTGCACTTTCCGCAAGCAGGACATCACCAGCGGCAGGAATCTGCTGCACCAGGGCCCGCTGCTCTGGAAGACAGCCACTGGAAGACTGAAAGATGTTCTGGCATTTTTGCTGTCTGATTCACTGGTGTTCCTTCAGGAGAAAGATCAGAAATACATTTTTGCTACTGTGGACCAGAAGCCTCCAGTGATCTCTTTGCAGAAACTAATTGTGCGTGAGGTGGCCAATGAAGAGAGAGGCATGTTTCTGATCAGTGCATCTTCAGCCGGGCCTGAGATGTACGAGGTGCATGCAGCCTCTAAAGATGAACGCAACGCCTGGATGAGACTCATCAGAGAGGCCGTGGAGAATTGCCCTGAAGAGGAGGATGAAACTACAAGTGAGTCAGAAGAGGAAAGGAGAGTCACAGAAGCAAAGGTCCAAAAGATCCACCGGCTGCAAGAGACGCTGTGTGGCCATGATCACCTCATCTGTTCCAATCTGGAGGAGAAGCTGCACATCTATGCCGAGCTGTCAGTGATGGCAGGCCAGCGAGAGGCAGGACCAGAGCCCAGGCTGCTGGTACGACCCAGCACTGAAGACGTTCCCCAGGCTGGAGTACTACTCAGCGCCGCTCTCAGAGAGGCGGAGAGCCTAAGAGCAGCTCTCTCCTCTCATTGTGCTTCCACTCCTCCCGTCCCGTCCGGTCCAGAAGATCTAAACAAACCTGAACCCTGCACTCCTCCATCTCCTCTGCCTCCTGAAAGTCCACTGACAGACCCCATCCAGAGTGAGGAGGAGGAGTGGAGAACTGAGGAAAACTTACTTAAAACATTCTTACTTTTTTTTACCATCCAAGACAGTTGCTATGAAGTGCAGAAGCTTCTTCTCCTGCTGATGTCAAGCCCCGCCCCTAACCAACACGGGCAGGCTCTGCATGAGCAGGAGCGCCAGCGGGAGGCCGAGCGCCGCCGGGAAGAGCTGGCGGATGTGGCTCGTCTGCGGGGACAGTGGGAGAGGGAGTGCCAGGCGCGGCAGCTTCAGCACTCAGAACTGGAGACCACGCTTGAGCAGAGGGAGCTCTTGTGCCACCTAGAGGAGCGGAGGCTGCAGAGCGAGCGGCAGGAGCTCCAGGAGCAGCTGCAGGAATACCAACAGAGTCTGGAGAGGCTCAGAGAAGGCCAGAGGAATGTGGAGAAGGAGAAGGAGAAACTGGAGACTCAGAAGATGCTGCTGGAGGGCTTGAAGCACGGGTGCCAGCAGAACCTTCCAGCTATGGTCATACCACTGGACGGACAGCAGACACAGGTGAGTGATGAGTGGGACTCAGTCGGGTCTGATGACGAGCATGGCTCTATTTTTGTCAATGAGGCAGCGTTCATATCTTCTTCTGTAAATAACAGGCACCTCCATCTTCAGCATCATCCACAGCATCATCACCAGACTGTCCATGTGCACTCAGGATCTATAGGATACTCAGATTCTCCCAGCGCTCAGAACAGTCTTAATTCACTGCTAGCCCGATCCAACCACAGACCCAGCTCTGCTGGAGCATCCGACCACAGCTGGACGTCTCTGAGGACAGGGGTAACGGGAGCGGGACTCCATCAAACTGATGTCCTGCTCGTCAGCCAGCCCTTCCTAAGCATGGAGACAGAGAACAGAGATACTGATGGAGAGGAGACCATCGTGTATCTCTGA
>TCONS_00060637
ACCGGTGGCGCATCCACAACCCCTGTGACCGTTCAAAACACTCGGCTTTGTACAAGTGCAAGTCACGCATACGGATGTATTGACCTTCAATCAGTCAGGATACTTTGTGCAAACAACCTGAAGGCTTTACATTGAGAAGTTGAAGAAAATACCTTCGTATGGAGTGAGGTGCTGCTGCTGTAATGGAGCTCAGCAGGGGAGAGGTGCCACTTTATgGTCAGGTGGAGGTCTGCGTGAAGCTGCCGCTGTCTGAGTTTGTTCAGGAGGAAACGGACTACTATGTGCTGCTTGTGGGCTCTTCCCTTCACCATGTAACTGCAGCTCATAGGACTGAGGATCACAGCTCCATTAGGTTCACTGTACCTGG

Function

symbol description
arhgef28a Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be located in cytoplasm. Is expressed in ball; head; notochord; somite; and trunk. Orthologous to human ARHGEF28 (Rho guanine nucleotide exchange factor 28).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0035023 regulation of Rho protein signal transduction biological_process
GO:0060415 muscle tissue morphogenesis biological_process
GO:0007030 Golgi organization biological_process
GO:0007160 cell-matrix adhesion biological_process
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060531-28 Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be located in cytoplasm. Is expressed in ball; head; notochord; somite; and trunk. Orthologous to human ARHGEF28 (Rho guanine nucleotide exchange factor 28).

Ensembl:

ensembl_id ENSDARG00000060415 ENSDARG00000093407

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060633 False 6091 mRNA 0.43 19 34827614 34875858
TCONS_00060634 False 6200 mRNA 0.50 34 34829497 34964830
TCONS_00060635 False 4803 mRNA 0.51 31 34830210 34921046
TCONS_00060637 True 367 processed_transcript 0.50 3 34918991 34964787

Neighbor

gene id symbol gene type direction distance location
XLOC_031219 hexb coding downstream 211015 34600714 ~ 34616599 (-)
XLOC_031218 BX296533.1 coding downstream 589591 34237907 ~ 34238023 (-)
XLOC_031217 fibcd1 coding downstream 642117 34066591 ~ 34185497 (-)
XLOC_031216 zgc:63972 coding downstream 867746 33940215 ~ 33959868 (-)
XLOC_031215 si:dkeyp-72a4.1 coding downstream 892218 33879807 ~ 33935396 (-)
XLOC_031222 btf3 coding upstream 22618 34987448 ~ 34997630 (-)
XLOC_031223 tmem174 coding upstream 140255 35105085 ~ 35108893 (-)
XLOC_031224 fcho2 coding upstream 158832 35123662 ~ 35201482 (-)
XLOC_031225 tnpo1 coding upstream 237233 35202063 ~ 35252761 (-)
XLOC_031226 ptcd2 coding upstream 288627 35253457 ~ 35264517 (-)
XLOC_031210 NA non-coding downstream 1540956 33286587 ~ 33286658 (-)
XLOC_031209 CU019641.3 non-coding downstream 1542017 33285526 ~ 33285597 (-)
XLOC_031200 NA non-coding downstream 1899695 32922656 ~ 32927919 (-)
XLOC_031198 NA non-coding downstream 1941740 32885179 ~ 32885874 (-)
XLOC_031229 NA non-coding upstream 558579 35523409 ~ 35540980 (-)
XLOC_031231 BX005476.1 non-coding upstream 858588 35823418 ~ 35823548 (-)
XLOC_031238 NA non-coding upstream 1857044 36821874 ~ 36829073 (-)
XLOC_031240 NA non-coding upstream 1938316 36903146 ~ 36907379 (-)
XLOC_031242 BX927323.1 non-coding upstream 1969738 36934568 ~ 36943975 (-)

Expression


Co-expression Network