Gene
RNA
| Item | Value |
|---|---|
| gene id | G1215118 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 11678915 ~ 11679509 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1387592 | True | 397 | lncRNA | 0.40 | 2 | 11678915 | 11679509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nocta | LOC106604687 | coding | downstream | 189729 | 11462015 ~ 11489186 (-) |
| LOC110488803 | LOC106604691 | coding | downstream | 265394 | 11398875 ~ 11413521 (-) |
| LOC118938776 | NA | coding | downstream | 276124 | 11402656 ~ 11402791 (-) |
| LOC110488801 | rab33b | coding | downstream | 285587 | 11390055 ~ 11393328 (-) |
| mgst2 | mgst2 | coding | downstream | 313061 | 11364601 ~ 11365854 (-) |
| LOC118938696 | NA | coding | upstream | 273870 | 11953379 ~ 11983501 (-) |
| LOC110488809 | LOC106604685 | coding | upstream | 579003 | 12258512 ~ 12276740 (-) |
| LOC110488811 | LOC106604684 | coding | upstream | 884402 | 12563911 ~ 12568719 (-) |
| LOC110488815 | LOC106604681 | coding | upstream | 908565 | 12588074 ~ 12669699 (-) |
| LOC110488813 | LOC106611787 | coding | upstream | 1012457 | 12691966 ~ 12696606 (-) |
| G1215065 | NA | non-coding | downstream | 6271 | 11672316 ~ 11672644 (-) |
| G1215064 | NA | non-coding | downstream | 7519 | 11671103 ~ 11671396 (-) |
| G1215050 | NA | non-coding | downstream | 20050 | 11658606 ~ 11658865 (-) |
| G1215040 | NA | non-coding | downstream | 33544 | 11645167 ~ 11645371 (-) |
| G1215021 | NA | non-coding | downstream | 52878 | 11625817 ~ 11626037 (-) |
| G1215185 | NA | non-coding | upstream | 79454 | 11758963 ~ 11759180 (-) |
| G1215205 | NA | non-coding | upstream | 91066 | 11770575 ~ 11770789 (-) |
| G1215206 | NA | non-coding | upstream | 92043 | 11771552 ~ 11771925 (-) |
| G1215215 | NA | non-coding | upstream | 97708 | 11777217 ~ 11777426 (-) |
| G1215261 | NA | non-coding | upstream | 103170 | 11782679 ~ 11783025 (-) |
| G1214997 | NA | other | downstream | 103208 | 11574807 ~ 11575707 (-) |
| LOC110488799 | LOC102314576 | other | downstream | 314755 | 11361504 ~ 11364211 (-) |
| LOC110488774 | LOC106604718 | other | downstream | 829332 | 10844755 ~ 10849852 (-) |
| LOC110488761 | NA | other | downstream | 1408045 | 10192267 ~ 10270937 (-) |
| G1215349 | NA | other | upstream | 214513 | 11894022 ~ 11896801 (-) |
| G1215447 | NA | other | upstream | 284984 | 11964493 ~ 11976777 (-) |
| G1216013 | NA | other | upstream | 798510 | 12478019 ~ 12478467 (-) |
| LOC110488817 | LOC105028880 | other | upstream | 1144137 | 12820904 ~ 12828721 (-) |
