G1215913


Basic Information

Item Value
gene id G1215913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 12389701 ~ 12390058 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1388436
CTGATgggtagactttccactgtagagtttatgtcatcttatcattgatgagaatgtctcagatgacaaccgaactgacatcatattcattaagtaccaccgcatatgttcaattggtcggattaccagaatatagctaatttccccccaccttctgatgttcccagaatctctatgttaaccaaggggtttgcaaatgtaacatcagtagggtagagagaggaaaaaggggggaagaggtatttatgactgtcattaacctacccccaggccaacgtcatgacactactGTGAGCAGATAAGTCAGAGAACGCCGGGACGGAGTCCACATGTTGGAATAGCTACAATTATATAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1388436 True 358 lncRNA 0.43 1 12389701 12390058

Neighbor

gene id symbol gene type direction distance location
LOC110488809 LOC106604685 coding downstream 112961 12258512 ~ 12276740 (-)
LOC118938696 NA coding downstream 406200 11953379 ~ 11983501 (-)
nocta LOC106604687 coding downstream 900515 11462015 ~ 11489186 (-)
LOC110488803 LOC106604691 coding downstream 976180 11398875 ~ 11413521 (-)
LOC110488811 LOC106604684 coding upstream 173853 12563911 ~ 12568719 (-)
LOC110488815 LOC106604681 coding upstream 198016 12588074 ~ 12669699 (-)
LOC110488813 LOC106611787 coding upstream 301908 12691966 ~ 12696606 (-)
LOC110488814 LOC106604680 coding upstream 322990 12713048 ~ 12737488 (-)
LOC110488816 LOC106604679 coding upstream 369108 12759166 ~ 12792580 (-)
G1215891 NA non-coding downstream 13407 12375931 ~ 12376294 (-)
G1215882 NA non-coding downstream 18474 12370864 ~ 12371227 (-)
G1215878 NA non-coding downstream 23301 12365908 ~ 12366400 (-)
G1215844 NA non-coding downstream 48818 12340621 ~ 12340883 (-)
G1215842 NA non-coding downstream 50895 12338594 ~ 12338806 (-)
G1215934 NA non-coding upstream 15768 12405826 ~ 12406036 (-)
G1215943 NA non-coding upstream 31665 12421723 ~ 12421922 (-)
G1215951 NA non-coding upstream 35524 12425582 ~ 12425786 (-)
G1215988 NA non-coding upstream 68405 12458463 ~ 12458676 (-)
G1215989 NA non-coding upstream 69458 12459516 ~ 12459738 (-)
G1215447 NA other downstream 412924 11964493 ~ 11976777 (-)
G1215349 NA other downstream 492900 11894022 ~ 11896801 (-)
G1214997 NA other downstream 813994 11574807 ~ 11575707 (-)
LOC110488801 rab33b other downstream 996396 11390055 ~ 11393328 (-)
LOC110488799 LOC102314576 other downstream 1025541 11361504 ~ 11364211 (-)
G1216013 NA other upstream 87961 12478019 ~ 12478467 (-)
LOC110488817 LOC105028880 other upstream 433588 12820904 ~ 12828721 (-)
G1216443 NA other upstream 451438 12841496 ~ 12842753 (-)
LOC110488853 LOC106604605 other upstream 1293726 13683784 ~ 13715500 (-)

Expression


Co-expression Network