Gene
RNA
| Item | Value |
|---|---|
| gene id | G1215934 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 12405826 ~ 12406036 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1388457 | True | 211 | lncRNA | 0.54 | 1 | 12405826 | 12406036 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488809 | LOC106604685 | coding | downstream | 129086 | 12258512 ~ 12276740 (-) |
| LOC118938696 | NA | coding | downstream | 422325 | 11953379 ~ 11983501 (-) |
| nocta | LOC106604687 | coding | downstream | 916640 | 11462015 ~ 11489186 (-) |
| LOC110488803 | LOC106604691 | coding | downstream | 992305 | 11398875 ~ 11413521 (-) |
| LOC110488811 | LOC106604684 | coding | upstream | 157875 | 12563911 ~ 12568719 (-) |
| LOC110488815 | LOC106604681 | coding | upstream | 182038 | 12588074 ~ 12669699 (-) |
| LOC110488813 | LOC106611787 | coding | upstream | 285930 | 12691966 ~ 12696606 (-) |
| LOC110488814 | LOC106604680 | coding | upstream | 307012 | 12713048 ~ 12737488 (-) |
| LOC110488816 | LOC106604679 | coding | upstream | 353130 | 12759166 ~ 12792580 (-) |
| G1215913 | NA | non-coding | downstream | 15768 | 12389701 ~ 12390058 (-) |
| G1215891 | NA | non-coding | downstream | 29532 | 12375931 ~ 12376294 (-) |
| G1215882 | NA | non-coding | downstream | 34599 | 12370864 ~ 12371227 (-) |
| G1215878 | NA | non-coding | downstream | 39426 | 12365908 ~ 12366400 (-) |
| G1215844 | NA | non-coding | downstream | 64943 | 12340621 ~ 12340883 (-) |
| G1215943 | NA | non-coding | upstream | 15687 | 12421723 ~ 12421922 (-) |
| G1215951 | NA | non-coding | upstream | 19546 | 12425582 ~ 12425786 (-) |
| G1215988 | NA | non-coding | upstream | 52427 | 12458463 ~ 12458676 (-) |
| G1215989 | NA | non-coding | upstream | 53480 | 12459516 ~ 12459738 (-) |
| G1216037 | NA | non-coding | upstream | 90313 | 12496349 ~ 12496669 (-) |
| G1215447 | NA | other | downstream | 429049 | 11964493 ~ 11976777 (-) |
| G1215349 | NA | other | downstream | 509025 | 11894022 ~ 11896801 (-) |
| G1214997 | NA | other | downstream | 830119 | 11574807 ~ 11575707 (-) |
| LOC110488801 | rab33b | other | downstream | 1012521 | 11390055 ~ 11393328 (-) |
| LOC110488799 | LOC102314576 | other | downstream | 1041666 | 11361504 ~ 11364211 (-) |
| G1216013 | NA | other | upstream | 71983 | 12478019 ~ 12478467 (-) |
| LOC110488817 | LOC105028880 | other | upstream | 417610 | 12820904 ~ 12828721 (-) |
| G1216443 | NA | other | upstream | 435460 | 12841496 ~ 12842753 (-) |
| LOC110488853 | LOC106604605 | other | upstream | 1277748 | 13683784 ~ 13715500 (-) |
