G1216443


Basic Information

Item Value
gene id G1216443
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 12841496 ~ 12842753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1389002
ccaaaaaatgtcggcagcattgaaggtccccaagaacacagtggtctccatcattcttaaatggaagaagtttggaaccactcatcctagagctggcagctcggccaaactgatcaatcgggggagaagggccttggtcagggaggtgactaagaacccgatggtcactctgacagagctccagagttcctctgtggagatgggagaaccttccaaaaggacaaccatctctgcaacacaacaccaatcaggcctttatggtagagtggccagacagaagccactcctcagtaaaaggcacatgacagcccacttggagtttgccaaaaggcacctaaaggactctgaccatgagaaacaagattctctggtctgatgaaaccaagatttaactcactggtctgaatgccaagtgtcacatctggaagaaacctggcaccatgcttacggtgaagcatggtgttggcagcatcatgctgtgaggaagggactgggagactagtcaggatcgagggaaagatgaacggagcaaagtaaagagagatacttgatgaaaacctgctctagagctctcaggacctcagactgggacaaaggttcaccttccaacaggacaacgaccttaagcacacagccaagacaacacaggattggcttcaggacaagtctctgaatatccttgagtggtccagccagagcccagacttgatcgaacatctctggagagacctgaaaagaatgggagaacttcccaaatacaggtgtgccaagcttgttttTAAAAATATTAATTGGCAAAGATTttgaaaaaacagtttttgctttgtcattatggggtattgtgtgtagattgatgaagaaaaaaacaattaaatccattttagaataagactgtaacataatgtggaaaaagtcacgggTTCtgaataaactcagcaaaaaaacaaacgtccctttttcagtaccctgtttttcaaagataattagtaaaaatccaaataacttcacagatcttcattgttaagggtttaaacactgtttcccatgcttgttcaatgatcctgtcacgccctgaccctagattgctttgtatgtttctacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatatgaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaa

Function

NR:

description
PREDICTED: zinc finger protein 271-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1389002 True 1258 TUCP 0.43 1 12841496 12842753

Neighbor

gene id symbol gene type direction distance location
LOC110488817 LOC105028880 coding downstream 12775 12820904 ~ 12828721 (-)
LOC110488816 LOC106604679 coding downstream 48916 12759166 ~ 12792580 (-)
LOC110488814 LOC106604680 coding downstream 104008 12713048 ~ 12737488 (-)
LOC110488813 LOC106611787 coding downstream 144890 12691966 ~ 12696606 (-)
LOC110488815 LOC106604681 coding downstream 171797 12588074 ~ 12669699 (-)
LOC110488818 tri65 coding upstream 378 12843131 ~ 12844679 (-)
ankrd13d LOC106604675 coding upstream 18026 12860779 ~ 12870657 (-)
kdm2ab LOC106604673 coding upstream 28044 12870797 ~ 12882582 (-)
stx3a LOC106604672 coding upstream 45959 12888712 ~ 12906848 (-)
ran ran1 coding upstream 76443 12919196 ~ 12923820 (-)
G1216426 NA non-coding downstream 9536 12831671 ~ 12831960 (-)
G1216425 NA non-coding downstream 9903 12831372 ~ 12831593 (-)
G1216408 NA non-coding downstream 45714 12795458 ~ 12795782 (-)
G1216386 NA non-coding downstream 94826 12746320 ~ 12746670 (-)
G1216371 NA non-coding downstream 112820 12728290 ~ 12728676 (-)
G1216446 NA non-coding upstream 3849 12846602 ~ 12846814 (-)
G1216447 NA non-coding upstream 4304 12847057 ~ 12847292 (-)
G1216741 NA non-coding upstream 27957 12870710 ~ 12906753 (-)
G1216761 NA non-coding upstream 65021 12907774 ~ 12908009 (-)
G1216765 NA non-coding upstream 70511 12913264 ~ 12913865 (-)
LOC110488811 LOC106604684 other downstream 272831 12563911 ~ 12568719 (-)
G1216013 NA other downstream 363029 12478019 ~ 12478467 (-)
G1215447 NA other downstream 864719 11964493 ~ 11976777 (-)
G1215349 NA other downstream 944695 11894022 ~ 11896801 (-)
LOC110488853 LOC106604605 other upstream 841031 13683784 ~ 13715500 (-)
LOC110488886 LOC106604622 other upstream 1714080 14542673 ~ 14642681 (-)
G1218808 NA other upstream 2151067 14993820 ~ 14994379 (-)
G1219208 NA other upstream 2475040 15317793 ~ 15318160 (-)
asb5a LOC101464329 other upstream 4555588 17395671 ~ 17399280 (-)

Expression


Co-expression Network