Gene
RNA
| Item | Value |
|---|---|
| gene id | G1216776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 12932649 ~ 12932918 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1389399 | True | 270 | lncRNA | 0.46 | 1 | 12932649 | 12932918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488824 | LOC105932619 | coding | downstream | 5392 | 12923946 ~ 12927257 (-) |
| ran | ran1 | coding | downstream | 8829 | 12919196 ~ 12923820 (-) |
| stx3a | LOC106604672 | coding | downstream | 25801 | 12888712 ~ 12906848 (-) |
| kdm2ab | LOC106604673 | coding | downstream | 50067 | 12870797 ~ 12882582 (-) |
| ankrd13d | LOC106604675 | coding | downstream | 61992 | 12860779 ~ 12870657 (-) |
| rad9a | rad9a | coding | upstream | 21442 | 12954360 ~ 12960532 (-) |
| p2rx3a | LOC106604801 | coding | upstream | 35880 | 12968798 ~ 12981689 (-) |
| ssrp1a | LOC106604666 | coding | upstream | 55346 | 12988264 ~ 13011711 (-) |
| med19a | LOC106604664 | coding | upstream | 178423 | 13107379 ~ 13114497 (-) |
| si:dkey-6i22.5 | pmf1 | coding | upstream | 181724 | 13114642 ~ 13116418 (-) |
| G1216765 | NA | non-coding | downstream | 18784 | 12913264 ~ 12913865 (-) |
| G1216761 | NA | non-coding | downstream | 24640 | 12907774 ~ 12908009 (-) |
| G1216741 | NA | non-coding | downstream | 25896 | 12870710 ~ 12906753 (-) |
| G1216447 | NA | non-coding | downstream | 85357 | 12847057 ~ 12847292 (-) |
| G1216446 | NA | non-coding | downstream | 85835 | 12846602 ~ 12846814 (-) |
| G1216780 | NA | non-coding | upstream | 2181 | 12935099 ~ 12935609 (-) |
| G1216787 | NA | non-coding | upstream | 17056 | 12949974 ~ 12951236 (-) |
| G1216788 | NA | non-coding | upstream | 28182 | 12961100 ~ 12961452 (-) |
| G1216791 | LOC106604669 | non-coding | upstream | 33722 | 12966640 ~ 12967986 (-) |
| G1216805 | NA | non-coding | upstream | 71401 | 13004319 ~ 13005322 (-) |
| G1216443 | NA | other | downstream | 89896 | 12841496 ~ 12842753 (-) |
| LOC110488817 | LOC105028880 | other | downstream | 103997 | 12820904 ~ 12828721 (-) |
| LOC110488811 | LOC106604684 | other | downstream | 363984 | 12563911 ~ 12568719 (-) |
| G1216013 | NA | other | downstream | 454182 | 12478019 ~ 12478467 (-) |
| G1215447 | NA | other | downstream | 955872 | 11964493 ~ 11976777 (-) |
| LOC110488853 | LOC106604605 | other | upstream | 750866 | 13683784 ~ 13715500 (-) |
| LOC110488886 | LOC106604622 | other | upstream | 1623915 | 14542673 ~ 14642681 (-) |
| G1218808 | NA | other | upstream | 2060902 | 14993820 ~ 14994379 (-) |
| G1219208 | NA | other | upstream | 2384875 | 15317793 ~ 15318160 (-) |
| asb5a | LOC101464329 | other | upstream | 4465423 | 17395671 ~ 17399280 (-) |
