Gene
RNA
| Item | Value |
|---|---|
| gene id | G1216849 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 13079662 ~ 13079868 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1389478 | True | 207 | lncRNA | 0.43 | 1 | 13079662 | 13079868 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ssrp1a | LOC106604666 | coding | downstream | 67951 | 12988264 ~ 13011711 (-) |
| p2rx3a | LOC106604801 | coding | downstream | 97973 | 12968798 ~ 12981689 (-) |
| rad9a | rad9a | coding | downstream | 119130 | 12954360 ~ 12960532 (-) |
| LOC110488824 | LOC105932619 | coding | downstream | 152405 | 12923946 ~ 12927257 (-) |
| ran | ran1 | coding | downstream | 155842 | 12919196 ~ 12923820 (-) |
| med19a | LOC106604664 | coding | upstream | 31473 | 13107379 ~ 13114497 (-) |
| si:dkey-6i22.5 | pmf1 | coding | upstream | 34774 | 13114642 ~ 13116418 (-) |
| LOC110488833 | LOC106611662 | coding | upstream | 42332 | 13122200 ~ 13145177 (-) |
| LOC110488835 | LOC106604661 | coding | upstream | 73811 | 13153679 ~ 13158596 (-) |
| LOC110488836 | NA | coding | upstream | 78812 | 13158680 ~ 13164686 (-) |
| G1216831 | NA | non-coding | downstream | 1370 | 13077461 ~ 13078292 (-) |
| G1216842 | NA | non-coding | downstream | 11516 | 13061842 ~ 13068146 (-) |
| G1216805 | NA | non-coding | downstream | 74340 | 13004319 ~ 13005322 (-) |
| G1216791 | LOC106604669 | non-coding | downstream | 111676 | 12966640 ~ 12967986 (-) |
| G1216788 | NA | non-coding | downstream | 118210 | 12961100 ~ 12961452 (-) |
| G1216890 | NA | non-coding | upstream | 73408 | 13153276 ~ 13153508 (-) |
| G1216906 | NA | non-coding | upstream | 121230 | 13201098 ~ 13202373 (-) |
| G1216443 | NA | other | downstream | 236909 | 12841496 ~ 12842753 (-) |
| LOC110488817 | LOC105028880 | other | downstream | 251010 | 12820904 ~ 12828721 (-) |
| LOC110488811 | LOC106604684 | other | downstream | 510997 | 12563911 ~ 12568719 (-) |
| G1216013 | NA | other | downstream | 601195 | 12478019 ~ 12478467 (-) |
| G1215447 | NA | other | downstream | 1102885 | 11964493 ~ 11976777 (-) |
| LOC110488853 | LOC106604605 | other | upstream | 603916 | 13683784 ~ 13715500 (-) |
| LOC110488886 | LOC106604622 | other | upstream | 1476965 | 14542673 ~ 14642681 (-) |
| G1218808 | NA | other | upstream | 1913952 | 14993820 ~ 14994379 (-) |
| G1219208 | NA | other | upstream | 2237925 | 15317793 ~ 15318160 (-) |
| asb5a | LOC101464329 | other | upstream | 4318473 | 17395671 ~ 17399280 (-) |
