Gene
RNA
| Item | Value |
|---|---|
| gene id | G1216890 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 13153276 ~ 13153508 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1389527 | True | 233 | lncRNA | 0.35 | 1 | 13153276 | 13153508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488833 | LOC106611662 | coding | downstream | 8099 | 13122200 ~ 13145177 (-) |
| si:dkey-6i22.5 | pmf1 | coding | downstream | 36858 | 13114642 ~ 13116418 (-) |
| med19a | LOC106604664 | coding | downstream | 38779 | 13107379 ~ 13114497 (-) |
| ssrp1a | LOC106604666 | coding | downstream | 141565 | 12988264 ~ 13011711 (-) |
| p2rx3a | LOC106604801 | coding | downstream | 171587 | 12968798 ~ 12981689 (-) |
| LOC110488835 | LOC106604661 | coding | upstream | 171 | 13153679 ~ 13158596 (-) |
| LOC110488836 | NA | coding | upstream | 5172 | 13158680 ~ 13164686 (-) |
| LOC110488837 | LOC106604660 | coding | upstream | 15306 | 13168814 ~ 13174417 (-) |
| LOC110488839 | LOC106604658 | coding | upstream | 50375 | 13203883 ~ 13213465 (-) |
| LOC110488846 | LOC106604652 | coding | upstream | 154522 | 13308030 ~ 13310487 (-) |
| G1216849 | NA | non-coding | downstream | 73408 | 13079662 ~ 13079868 (-) |
| G1216831 | NA | non-coding | downstream | 74984 | 13077461 ~ 13078292 (-) |
| G1216842 | NA | non-coding | downstream | 85130 | 13061842 ~ 13068146 (-) |
| G1216906 | NA | non-coding | upstream | 47590 | 13201098 ~ 13202373 (-) |
| G1216925 | NA | non-coding | upstream | 61571 | 13215079 ~ 13266417 (-) |
| G1216938 | NA | non-coding | upstream | 72503 | 13226011 ~ 13227315 (-) |
| G1216909 | NA | non-coding | upstream | 90313 | 13243821 ~ 13316860 (-) |
| G1216443 | NA | other | downstream | 310523 | 12841496 ~ 12842753 (-) |
| LOC110488817 | LOC105028880 | other | downstream | 324624 | 12820904 ~ 12828721 (-) |
| LOC110488811 | LOC106604684 | other | downstream | 584611 | 12563911 ~ 12568719 (-) |
| G1216013 | NA | other | downstream | 674809 | 12478019 ~ 12478467 (-) |
| G1215447 | NA | other | downstream | 1176499 | 11964493 ~ 11976777 (-) |
| LOC110488853 | LOC106604605 | other | upstream | 530276 | 13683784 ~ 13715500 (-) |
| LOC110488886 | LOC106604622 | other | upstream | 1403325 | 14542673 ~ 14642681 (-) |
| G1218808 | NA | other | upstream | 1840312 | 14993820 ~ 14994379 (-) |
| G1219208 | NA | other | upstream | 2164285 | 15317793 ~ 15318160 (-) |
| asb5a | LOC101464329 | other | upstream | 4244833 | 17395671 ~ 17399280 (-) |
