Gene
RNA
| Item | Value |
|---|---|
| gene id | G1217351 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 13682524 ~ 13682754 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable carboxypeptidase X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1390025 | True | 231 | lncRNA | 0.57 | 1 | 13682524 | 13682754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938697 | NA | coding | downstream | 21248 | 13645835 ~ 13661276 (-) |
| LOC110488850 | LOC106604647 | coding | downstream | 281850 | 13391685 ~ 13400674 (-) |
| LOC110488848 | LOC106604648 | coding | downstream | 315526 | 13357818 ~ 13366998 (-) |
| LOC110487735 | LOC106604649 | coding | downstream | 334185 | 13332261 ~ 13348339 (-) |
| LOC110488846 | LOC106604652 | coding | downstream | 372037 | 13308030 ~ 13310487 (-) |
| LOC110487738 | LOC106596785 | coding | upstream | 269 | 13683023 ~ 13697209 (-) |
| LOC110488852 | LOC106604643 | coding | upstream | 4873 | 13687627 ~ 13704064 (-) |
| LOC110488853 | LOC106604605 | coding | upstream | 27312 | 13683784 ~ 13715500 (-) |
| LOC110488858 | LOC106604641 | coding | upstream | 55673 | 13738427 ~ 13748171 (-) |
| LOC110488856 | LOC106604639 | coding | upstream | 70599 | 13753353 ~ 13764618 (-) |
| G1217350 | NA | non-coding | downstream | 1024 | 13681270 ~ 13681500 (-) |
| G1217349 | NA | non-coding | downstream | 1648 | 13680537 ~ 13680876 (-) |
| G1217339 | NA | non-coding | downstream | 14656 | 13667636 ~ 13667868 (-) |
| G1217335 | NA | non-coding | downstream | 17921 | 13664336 ~ 13664603 (-) |
| G1217327 | NA | non-coding | downstream | 32675 | 13649598 ~ 13649849 (-) |
| G1217480 | NA | non-coding | upstream | 94829 | 13777583 ~ 13780174 (-) |
| G1217478 | NA | non-coding | upstream | 104438 | 13787192 ~ 13790418 (-) |
| LOC110488864 | LOC106604798 | non-coding | upstream | 111388 | 13794142 ~ 13796834 (-) |
| G1216443 | NA | other | downstream | 839771 | 12841496 ~ 12842753 (-) |
| LOC110488817 | LOC105028880 | other | downstream | 853872 | 12820904 ~ 12828721 (-) |
| LOC110488811 | LOC106604684 | other | downstream | 1113859 | 12563911 ~ 12568719 (-) |
| G1216013 | NA | other | downstream | 1204057 | 12478019 ~ 12478467 (-) |
| G1215447 | NA | other | downstream | 1705747 | 11964493 ~ 11976777 (-) |
| LOC110488886 | LOC106604622 | other | upstream | 874079 | 14542673 ~ 14642681 (-) |
| G1218808 | NA | other | upstream | 1311066 | 14993820 ~ 14994379 (-) |
| G1219208 | NA | other | upstream | 1635039 | 15317793 ~ 15318160 (-) |
| asb5a | LOC101464329 | other | upstream | 3715587 | 17395671 ~ 17399280 (-) |
