Gene
RNA
| Item | Value |
|---|---|
| gene id | G1218782 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 14968206 ~ 14968480 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1391538 | True | 275 | lncRNA | 0.37 | 1 | 14968206 | 14968480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488888 | spy1 | coding | downstream | 62641 | 14901333 ~ 14905565 (-) |
| LOC110488886 | LOC106604622 | coding | downstream | 325525 | 14542673 ~ 14642681 (-) |
| LOC110488882 | LOC106604623 | coding | downstream | 661430 | 14298386 ~ 14306776 (-) |
| arl9 | LOC106604625 | coding | downstream | 670538 | 14291820 ~ 14297668 (-) |
| LOC110488875 | nbp1a | coding | downstream | 746591 | 14206617 ~ 14221615 (-) |
| LOC118938699 | spata5 | coding | upstream | 44347 | 15012827 ~ 15021150 (-) |
| LOC110488889 | NA | coding | upstream | 63866 | 15032346 ~ 15035966 (-) |
| LOC100136280 | LOC106604591 | coding | upstream | 87568 | 15056048 ~ 15061199 (-) |
| bbs12 | LOC106604585 | coding | upstream | 94736 | 15063216 ~ 15065973 (-) |
| adad1 | adad1 | coding | upstream | 177825 | 15146305 ~ 15163835 (-) |
| G1218781 | NA | non-coding | downstream | 2317 | 14965646 ~ 14965889 (-) |
| G1218771 | NA | non-coding | downstream | 11564 | 14956352 ~ 14956642 (-) |
| G1218760 | NA | non-coding | downstream | 27857 | 14939568 ~ 14940349 (-) |
| G1218744 | NA | non-coding | downstream | 44223 | 14923758 ~ 14923983 (-) |
| G1218739 | NA | non-coding | downstream | 54661 | 14913209 ~ 14913545 (-) |
| G1218799 | NA | non-coding | upstream | 14730 | 14983210 ~ 14983463 (-) |
| G1218812 | NA | non-coding | upstream | 31010 | 14999490 ~ 14999698 (-) |
| G1218820 | NA | non-coding | upstream | 36536 | 15005016 ~ 15005350 (-) |
| G1218965 | NA | non-coding | upstream | 59965 | 15028445 ~ 15028945 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 1253329 | 13683784 ~ 13715500 (-) |
| G1216443 | NA | other | downstream | 2125453 | 12841496 ~ 12842753 (-) |
| LOC110488817 | LOC105028880 | other | downstream | 2139554 | 12820904 ~ 12828721 (-) |
| LOC110488811 | LOC106604684 | other | downstream | 2399541 | 12563911 ~ 12568719 (-) |
| G1218808 | NA | other | upstream | 25340 | 14993820 ~ 14994379 (-) |
| G1219208 | NA | other | upstream | 349313 | 15317793 ~ 15318160 (-) |
| asb5a | LOC101464329 | other | upstream | 2429861 | 17395671 ~ 17399280 (-) |
| G1225043 | LOC108238713 | other | upstream | 4867398 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 5165231 | 20133711 ~ 20134053 (-) |
