G1220112


Basic Information

Item Value
gene id G1220112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 15679855 ~ 15680357 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1392983
ctaccttgaaccaaaaagggttctgcctGAAATCAAAAAAGGTTCTCCCAGAacacttttggaaccctttttttctaagattgtACTTAGCCAAATCTCACAATTCAACATAGGCGTTGGGGGCAAAATAACTTCCATATAAATACATAGTGACATCCCTGTCACTACATTTAATGTCAACAAGCACATGCAATGAGATAATCTATGTTCAAATGTGTCCATCCATACTGCTATCTAGATTGCACCACACAAtacacactctctcccttccttacCCTCTGCCCTTTCTCCCCTCCCATCTGCTGAACAGTTTGCCGCGCTTTCTCCTTGATGCCGCTACTTTCACCATTCTATCTGTCCTCTCCTAATTCTCCCTGTTGGTTACAGCTACATAGTTTGATGGACTGTTAAATGGCCAGCAGACATGTGAGATTTGCTTCCGGGTTCCAAGATTAGGTATTACAGCACATGTTCATTTGTGTAGTAATAGTACTGTGTTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1392983 True 503 lncRNA 0.42 1 15679855 15680357

Neighbor

gene id symbol gene type direction distance location
LOC110488902 LOC106604579 coding downstream 51222 15617903 ~ 15628633 (-)
LOC110488901 LOC106604584 coding downstream 117160 15557717 ~ 15562695 (-)
nanos1 nano1 coding downstream 175050 15502250 ~ 15504805 (-)
lbx2 LOC106604581 coding downstream 307049 15370261 ~ 15372806 (-)
adad1 adad1 coding downstream 516020 15146305 ~ 15163835 (-)
LOC110488905 LOC106604573 coding upstream 102730 15783087 ~ 15804150 (-)
LOC110488908 LOC106604571 coding upstream 158248 15838605 ~ 15860342 (-)
LOC110488909 LOC106604570 coding upstream 184530 15864887 ~ 15888346 (-)
LOC110488910 LOC106604568 coding upstream 209051 15889408 ~ 16064840 (-)
LOC110488912 LOC106604567 coding upstream 387723 16068080 ~ 16114181 (-)
G1220111 NA non-coding downstream 596 15678966 ~ 15679259 (-)
G1219680 NA non-coding downstream 44298 15633590 ~ 15635557 (-)
G1219642 NA non-coding downstream 62620 15616480 ~ 15617235 (-)
G1219641 NA non-coding downstream 63447 15615913 ~ 15616408 (-)
G1219669 NA non-coding downstream 71232 15608387 ~ 15608623 (-)
G1220113 NA non-coding upstream 284 15680641 ~ 15680873 (-)
G1220199 NA non-coding upstream 146387 15826744 ~ 15827206 (-)
G1220205 NA non-coding upstream 154380 15834737 ~ 15835011 (-)
G1220207 NA non-coding upstream 156319 15836676 ~ 15836896 (-)
G1220203 NA non-coding upstream 162560 15842917 ~ 15843171 (-)
G1219208 NA other downstream 361695 15317793 ~ 15318160 (-)
G1218808 NA other downstream 685476 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 1122474 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 1964978 13683784 ~ 13715500 (-)
G1216443 NA other downstream 2837102 12841496 ~ 12842753 (-)
asb5a LOC101464329 other upstream 1717984 17395671 ~ 17399280 (-)
G1225043 LOC108238713 other upstream 4155521 19835878 ~ 19836319 (-)
G1225499 NA other upstream 4453354 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 4641421 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 4785373 20465730 ~ 20470523 (-)

Expression


Co-expression Network