Gene
RNA
| Item | Value |
|---|---|
| gene id | G1220203 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 15842917 ~ 15843171 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1393082 | True | 255 | lncRNA | 0.46 | 1 | 15842917 | 15843171 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488905 | LOC106604573 | coding | downstream | 38767 | 15783087 ~ 15804150 (-) |
| LOC110488902 | LOC106604579 | coding | downstream | 214284 | 15617903 ~ 15628633 (-) |
| LOC110488901 | LOC106604584 | coding | downstream | 280222 | 15557717 ~ 15562695 (-) |
| nanos1 | nano1 | coding | downstream | 338112 | 15502250 ~ 15504805 (-) |
| lbx2 | LOC106604581 | coding | downstream | 470111 | 15370261 ~ 15372806 (-) |
| LOC110488909 | LOC106604570 | coding | upstream | 21716 | 15864887 ~ 15888346 (-) |
| LOC110488910 | LOC106604568 | coding | upstream | 46237 | 15889408 ~ 16064840 (-) |
| LOC110488912 | LOC106604567 | coding | upstream | 224909 | 16068080 ~ 16114181 (-) |
| LOC110488913 | LOC106604565 | coding | upstream | 276698 | 16119869 ~ 16192632 (-) |
| LOC110489472 | LOC106604583 | coding | upstream | 369566 | 16212737 ~ 16215634 (-) |
| G1220207 | NA | non-coding | downstream | 6021 | 15836676 ~ 15836896 (-) |
| G1220205 | NA | non-coding | downstream | 7906 | 15834737 ~ 15835011 (-) |
| G1220199 | NA | non-coding | downstream | 15711 | 15826744 ~ 15827206 (-) |
| G1220113 | NA | non-coding | downstream | 162044 | 15680641 ~ 15680873 (-) |
| G1220112 | NA | non-coding | downstream | 162560 | 15679855 ~ 15680357 (-) |
| G1220265 | NA | non-coding | upstream | 94514 | 15937685 ~ 15938231 (-) |
| G1220291 | NA | non-coding | upstream | 149777 | 15992948 ~ 15993360 (-) |
| G1220312 | NA | non-coding | upstream | 222476 | 16065647 ~ 16065857 (-) |
| G1220313 | NA | non-coding | upstream | 222923 | 16066094 ~ 16066340 (-) |
| G1220314 | NA | non-coding | upstream | 223880 | 16067051 ~ 16067266 (-) |
| G1219208 | NA | other | downstream | 524757 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 848538 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 1285536 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 2128040 | 13683784 ~ 13715500 (-) |
| G1216443 | NA | other | downstream | 3000164 | 12841496 ~ 12842753 (-) |
| asb5a | LOC101464329 | other | upstream | 1555170 | 17395671 ~ 17399280 (-) |
| G1225043 | LOC108238713 | other | upstream | 3992707 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 4290540 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 4478607 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 4622559 | 20465730 ~ 20470523 (-) |
