Gene
RNA
| Item | Value |
|---|---|
| gene id | G1220265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 15937685 ~ 15938231 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1393153 | True | 354 | lncRNA | 0.49 | 2 | 15937685 | 15938231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488909 | LOC106604570 | coding | downstream | 49339 | 15864887 ~ 15888346 (-) |
| LOC110488908 | LOC106604571 | coding | downstream | 77343 | 15838605 ~ 15860342 (-) |
| LOC110488905 | LOC106604573 | coding | downstream | 133535 | 15783087 ~ 15804150 (-) |
| LOC110488902 | LOC106604579 | coding | downstream | 309052 | 15617903 ~ 15628633 (-) |
| LOC110488901 | LOC106604584 | coding | downstream | 374990 | 15557717 ~ 15562695 (-) |
| LOC110488912 | LOC106604567 | coding | upstream | 129849 | 16068080 ~ 16114181 (-) |
| LOC110488913 | LOC106604565 | coding | upstream | 181638 | 16119869 ~ 16192632 (-) |
| LOC110489472 | LOC106604583 | coding | upstream | 274506 | 16212737 ~ 16215634 (-) |
| LOC110488917 | LOC106604562 | coding | upstream | 413520 | 16351751 ~ 16669973 (-) |
| LOC118938700 | NA | coding | upstream | 1006029 | 16944260 ~ 16945763 (-) |
| G1220203 | NA | non-coding | downstream | 94514 | 15842917 ~ 15843171 (-) |
| G1220207 | NA | non-coding | downstream | 100789 | 15836676 ~ 15836896 (-) |
| G1220205 | NA | non-coding | downstream | 102674 | 15834737 ~ 15835011 (-) |
| G1220199 | NA | non-coding | downstream | 110479 | 15826744 ~ 15827206 (-) |
| G1220113 | NA | non-coding | downstream | 256812 | 15680641 ~ 15680873 (-) |
| G1220291 | NA | non-coding | upstream | 54717 | 15992948 ~ 15993360 (-) |
| G1220312 | NA | non-coding | upstream | 127416 | 16065647 ~ 16065857 (-) |
| G1220313 | NA | non-coding | upstream | 127863 | 16066094 ~ 16066340 (-) |
| G1220314 | NA | non-coding | upstream | 128820 | 16067051 ~ 16067266 (-) |
| G1220363 | NA | non-coding | upstream | 233352 | 16171583 ~ 16171880 (-) |
| G1219208 | NA | other | downstream | 619525 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 943306 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 1380304 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 2222808 | 13683784 ~ 13715500 (-) |
| G1216443 | NA | other | downstream | 3094932 | 12841496 ~ 12842753 (-) |
| asb5a | LOC101464329 | other | upstream | 1460110 | 17395671 ~ 17399280 (-) |
| G1225043 | LOC108238713 | other | upstream | 3897647 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 4195480 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 4383547 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 4527499 | 20465730 ~ 20470523 (-) |
