XLOC_031257 (mpzl2b)


Basic Information

Item Value
gene id XLOC_031257
gene name mpzl2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 37948283 ~ 37963763 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060698
ATAAGAAACATGTTGTAACATGAACTGGAGAAACAGAATGGGGCaggttatttttctgtttttgggAATTGCCGTGTAGCTAGTCTGCCTTGCAGGTTTGTTGACGCCCTTTTAACTCCTCCTCTTTTCACTCACGGAGAAAAAGTGATTTAGCATGGCCGCTGTGCTCAGGAGTGCCGAAGTTTAACCAATACTTATATACTGGGTTTAAATACTGTACGAGGCTTGATATTTAGTAAACAGGAGTCTACCGACATTTCCAGGAGCTCTGATAGCTCCTCCACTGTATTCTAATGAGGAGAATGTGGATTTACCTGTCTTCAGCGCTATGTGCGCTTGTCTTTACAGGTGTATATCAGGTGGAAGGAATGGAGGTGTTTACATCTTCAGAGTTGGAGGCAGTCAATGGGACAGAAATACGTctcaaatgtacatttaaatctaACCGTCCGCTCTCTGAAGAAAGGACCTCTGTATCCTGGAGCTTCATGCCACTTGGAAAGACGAAAGAAGAACCTtttttccactacCAGGGACATGCATATCTTCCTCCTGGCGGCCTGTTTAAGGATCATGTGGTATGGTCTGGTGATGTAATGAAGGGTGACGGATCCATCACACTGCAGGATGTGCAGTTCAGCTTTAATGGTACCTACAGCTGCCAAGTCCTAAATCCGCCCGACATCCAGGGCTTTGCAGGAGAGATCAAACTCCGAGTCGTTCAGAAAGtttcATTCTCTGAAATCGGGATTCTGGCTATAGCTGTGGGTGGATCGATTGGCGTCATTCTCCTCATTCTCATCATCTACATCGTTGTGCGGGTATTTCGGAGACGAGAAGAGGACATGACCGTTGAGACGGAGGACCACAGGTTAAAGGATCAGGTTTTGTGAAAGAGGATTTTTGACTCTGGGATTTAGTCTGCTTTTCGATTCCTGTCTGGGATATGACTAGTGATATAAGAAGTAATAACATATTTTGCCACAGAATCCTCTGATTATATGAGCAgaatatattgcagaatatctTGAAACCATATTGATCACTACAATATTACagtgaaatgttgtttttttatcctgatatgtttttatttgatgacttttttaatgtttgaaagTTAGTGCTAAATTTAATtccattttatataaataaagtgagaaaattaaacctttctatttttaaaaagatataaaatatcAGTTCACATATGTACATAACTTTATTGACTGTTGCTGCTTTTTATCTCATTATTTTGTAACTATTGAATTATTGCTGTTTTCCAGCAGTTTGTACTATCACAGATGTATGTGATCTGCCTATTTACATGCGTGTCTCCATACACGTTGATGCATTTCTGTGTTTGTACATTAGATGTGGTTTATAGACCTGTGCAGCAGAAAAAATAATATCTGTAAATATCTGTAAAAGAGCAGTATAATTTCTAAAACCAGTTAAACATTTTGAGAATGTatatgaatggatgaaaaaaaaCTGCATCAAATAATAATGATCGAACAAATGTTTATTGGTGCTTGTTACATAAACCTCAAATCTCCAGGGTTGTGGGATTCTCTGTTCATAAATGCTGGAATGCTTAAAAAGCTT
>TCONS_00060699
TTGTGCATTGAAGATTATACAATTCATGAATGTCTGCAGTGACTGGTACAGACAGGGATGATCCCGATAATGTTAATCTAATGATCTAACGGAGAAGAATGAATCAAATAGCGGGACAAAAGAAAAGGCAGCACATTGCCGGGCGCTCGACAAACGGGTCTCTATGCGCGCCTCCTCCTCTCGACTGACCTGGCGACAGTGTTTACAGATCCCGAACGAGCTGCGGGTGTGCAGCAGGGCAGGGCTCCCTCAATCACGCACAGCAGCACCGCAGTCCAGTCCACTGAACGACTGTCCGGGGAAGAAGATGCGGACGATTGTTTCTGCTGCCGCCGCGCACCCCGACTTTGCTGTTCCAGCCCTGCCTTAAAGAAATGCAAGCTCACGTGACAGTGTTGGCTGTTTAATAATGGTGTTGGGTGGTTTAATTAAGCGGTGATGAAGCGCGACGTCTTTTCAAGAAATCACAGTAAATGTTTGATTATGTAAAGCGAATAGCATCCAGCCAACCACCTCCCGCTTCCCTGCGCAACCGCCCTCGCACTTTCTGGAAGCCTCACTTCCGCCTACAGCCTTCGTCACGCACTTCCCATTCAGACCACCCGTCCCCATGAAGGCAAAATACAGGCGAGAGCTGTGACTGGAACACACACAGGTGTATATCAGGTGGAAGGAATGGAGGTGTTTACATCTTCAGAGTTGGAGGCAGTCAATGGGACAGAAATACGTctcaaatgtacatttaaatctaACCGTCCGCTCTCTGAAGAAAGGACCTCTGTATCCTGGAGCTTCATGCCACTTGGAAAGACGAAAGAAGAACCTtttttccactacCAGGGACATGCATATCTTCCTCCTGGCGGCCTGTTTAAGGATCATGTGGTATGGTCTGGTGATGTAATGAAGGGTGACGGATCCATCACACTGCAGGATGTGCAGTTCAGCTTTAATGGTACCTACAGCTGCCAAGTCCTAAATCCGCCCGACATCCAGGGCTTTGCAGGAGAGATCAAACTCCGAGTCGTTCAGAAAGtttcATTCTCTGAAATCGGGATTCTGGCTATAGCTGTGGGTGGATCGATTGGCGTCATTCTCCTCATTCTCATCATCTACATCGTTGTGCGGGTATTTCGGAGACGAGAAGAGGACATGACCGTTGAGACGGAGGACCACAGGTTAAAGGATCAGGTTTTGTGAAAGAGGATTTTTGACTCTGGGATTTAGTCTGCTTTTCGATTCCTGTCTGGGATATGACTAGTGATATAAGAAGTAATAACATATTTTGCCACAGAATCCTCTGATTATATGAGCAgaatatattgcagaatatctTGAAACCAT
>TCONS_00060700
CCAGAGACACGTGTTTAGTAAAGTACGGCTTATAAAACTATTTTCAATTTCCCAAGAAAAGACACTGCGTTAATTGTCATTTCGATGTTGTTGCCAATGCCACACATAAGAAACATGTTGTAACATGAACTGGAGAAACAGAATGGGGTGTATATCAGGTGGAAGGAATGGAGGTGTTTACATCTTCAGAGTTGGAGGCAGTCAATGGGACAGAAATACGTctcaaatgtacatttaaatctaACCGTCCGCTCTCTGAAGAAAGGACCTCTGTATCCTGGAGCTTCATGCCACTTGGAAAGACGAAAGAAGAACCTtttttccactacCAGGGACATGCATATCTTCCTCCTGGCGGCCTGTTTAAGGATCATGTGGTATGGTCTGGTGATGTAATGAAGGGTGACGGATCCATCACACTGCAGGATGTGCAGTTCAGCTTTAATGGTACCTACAGCTGCCAAGTCCTAAATCCGCCCGACATCCAGGGCTTTGCAGGAGAGATCAAACTCCGAGTCGTTCAGAAAG

Function

symbol description
mpzl2b Enables identical protein binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including digestive system; epidermis; periderm; pronephric duct; and sensory system. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 111. Orthologous to human MPZL2 (myelin protein zero like 2).

GO:

id name namespace
GO:0098609 cell-cell adhesion biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005515 protein binding molecular_function
GO:0042802 identical protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8774 Enables identical protein binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including digestive system; epidermis; periderm; pronephric duct; and sensory system. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 111. Orthologous to human MPZL2 (myelin protein zero like 2).

Ensembl:

ensembl_id ENSDARG00000027345

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060698 False 1608 mRNA 0.38 4 37948283 37959874
TCONS_00060699 False 1344 processed_transcript 0.48 4 37948854 37963763
TCONS_00060700 True 528 processed_transcript 0.45 3 37953336 37959979

Neighbor

gene id symbol gene type direction distance location
XLOC_031256 scn4bb coding downstream 12662 37918810 ~ 37935621 (-)
XLOC_031255 tmprss13b coding downstream 47888 37888095 ~ 37900395 (-)
XLOC_031254 si:ch211-139a5.9 coding downstream 62206 37884022 ~ 37886077 (-)
XLOC_031253 arhgap35b coding downstream 66938 37864705 ~ 37881345 (-)
XLOC_031252 AL935065.1 coding downstream 127405 37817870 ~ 37820878 (-)
XLOC_031258 si:ch211-139a5.1 coding upstream 18037 37981800 ~ 37997809 (-)
XLOC_031259 BX640520.1 coding upstream 71574 38035337 ~ 38038217 (-)
XLOC_031260 si:dkey-111e8.5 coding upstream 97196 38060959 ~ 38064065 (-)
XLOC_031261 si:ch211-284e13.4 coding upstream 124831 38088594 ~ 38094130 (-)
XLOC_031262 si:ch211-284e13.14 coding upstream 141138 38104901 ~ 38107741 (-)
XLOC_031251 NA non-coding downstream 236433 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 344548 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 465263 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 675972 37266944 ~ 37272311 (-)
XLOC_031242 BX927323.1 non-coding downstream 1004308 36934568 ~ 36943975 (-)
XLOC_031269 NA non-coding upstream 286281 38250044 ~ 38255744 (-)
XLOC_031276 NA non-coding upstream 651105 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 657194 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 733733 38697496 ~ 38705831 (-)

Expression


Co-expression Network