XLOC_031260 (si:dkey-111e8.5)


Basic Information

Item Value
gene id XLOC_031260
gene name si:dkey-111e8.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38060959 ~ 38064065 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060705
AGATGTATGGCGTAGATTAGGGGTGTCAAATTTAGTTGCTAACACCGCCTCCAACCCTGTTTCATCACATTTACCTGTAGGATTCAAAGAAGACAAACGGACtctattagtttgatcaggtaaCTGAAACTCAACTGCGCAGAGCTTCgtcccttcaggaactgagtttgtcGCCTGTGGCGTAGATTATAAATCTGCTTTCACTTTCTTATTCTTTCAACCTCAACCCCTTCACCGGAAGAGTTAAGCGTTAAGGTGATCCAACTTTGCTCAGCAAGATTTCTACGAACAACTGTAGACTACTTAAGATATAAGCGAACGTTTTTTATCCCTTCACTTCAGAAtataatgttggaaaaaatttattacaaagtCATGACACCTAAAAATGTTGAACAAACTGCTCTAGAATTCGAGGAAAATctaaaaaagaatataaaatatgttaaattaaaaaatgtggagaggggaaaaaaaacaagagaaaagcCCAGTGATGTTCACCTGGCTTTCTGTCCGGTAGTTTCTCGCACTGGAACTGACATTGATGCGACACTCAAGAAAATTAAAGACGATACACCGACCATTTTAGTGGTGCTTCATCACACATTTGACACTGAGGTTGTTGTGTCAAATAGCAGTACATTTGTGGCAAGGGAGAATATGCTTGTTGTTGACTGTCTGTTCTACGAGGGTAAAGGATTGCTTGCCTGTAAAAAAAATAAGGAGGCTTATAAAGAAGCTGCAAAGTGGCTAAAAAACCGAAAGGAAGCTGTTGGCAATTCAAGCCGCAAGCAGGACACATCCTCCCCAGATGTCCGGTCTAGTAGAAATGATCATAATAGAGATGAACGCAAAAAACCTGATGCctccaagaaaaaaaagaaaacttgtgTTATTCTCTGAACAGTGAAATTGATCACATCAGGCAAGCACTGCAAAATACAACaaactttaaaattttacattctGCACATCTGTATTGGAAAACAACATGGTggattaattttttattgtttcatatgttttaaatgcatttttatgacCAATGTTGAGAATA
>TCONS_00060706
atgttggaaaaaatttattacaaagtCATGACACCTAAAAATGTTGAACAAACTGCTCTAGAATTCGAGGAAAATctaaaaaagaatataaaatatgttaaattaaaaaatgtggagaggggaaaaaaaacaagagaaaagcCCAGTGATGTTCACCTGGCTTTCTGTCCGGTAGTTTCTCGCACTGGAACTGACATTGATGCGACACTCAAGAAAATTAAAGACGATACACCGACCATTTTAGTGGTGCTTCATCACACATTTGACACTGAGGTTGTTGTGTCAAATAGCAGTACATTTGTGGCAAGGGAGAATATGCTTGTTGTTGACTGTCTGTTCTACGAGGGTAAAGGATTGCTTGCCTGTAAAAAAAATAAGGAGGCTTATAAAGAAGCTGCAAAGTGGCTAAAAAACCGAAAGGAAGCTGTTGGCAATTCAAGCCGCAAGCAGGACACATCCTCCCCAGATGTCCGGTCTAGTAGAAATGATCATAATAGAGATGAACGCAAAAAACCTGATGCctccaagaaaaaaaagaaaacttgtgTTATTCTCTGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-192 No description available

Ensembl:

ensembl_id ENSDARG00000093960

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060705 False 1060 mRNA 0.38 6 38060959 38064065
TCONS_00060706 True 558 mRNA 0.38 5 38061113 38063585

Neighbor

gene id symbol gene type direction distance location
XLOC_031259 BX640520.1 coding downstream 22742 38035337 ~ 38038217 (-)
XLOC_031258 si:ch211-139a5.1 coding downstream 63150 37981800 ~ 37997809 (-)
XLOC_031257 mpzl2b coding downstream 97196 37948283 ~ 37963763 (-)
XLOC_031256 scn4bb coding downstream 125338 37918810 ~ 37935621 (-)
XLOC_031255 tmprss13b coding downstream 160564 37888095 ~ 37900395 (-)
XLOC_031261 si:ch211-284e13.4 coding upstream 24529 38088594 ~ 38094130 (-)
XLOC_031262 si:ch211-284e13.14 coding upstream 40836 38104901 ~ 38107741 (-)
XLOC_031263 si:ch211-284e13.6 coding upstream 46319 38110384 ~ 38122126 (-)
XLOC_031264 gucy2d coding upstream 59568 38123633 ~ 38161033 (-)
XLOC_031265 si:ch211-284e13.12 coding upstream 103745 38167810 ~ 38170996 (-)
XLOC_031251 NA non-coding downstream 349109 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 457224 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 577939 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 788648 37266944 ~ 37272311 (-)
XLOC_031269 NA non-coding upstream 185979 38250044 ~ 38255744 (-)
XLOC_031276 NA non-coding upstream 550803 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 556892 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 633431 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 726667 38790732 ~ 38791845 (-)

Expression


Co-expression Network