Gene
RNA
| Item | Value |
|---|---|
| gene id | G1221901 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 17292123 ~ 17292355 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_03751 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1394857 | True | 233 | lncRNA | 0.45 | 1 | 17292123 | 17292355 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489473 | LOC107705928 | coding | downstream | 265010 | 17022759 ~ 17027113 (-) |
| LOC110488920 | gar1 | coding | downstream | 315427 | 16971499 ~ 16976696 (-) |
| LOC110488919 | adhx | coding | downstream | 321240 | 16963108 ~ 16970883 (-) |
| eif4ea | LOC106604514 | coding | downstream | 329568 | 16958673 ~ 16962555 (-) |
| LOC118938700 | NA | coding | downstream | 346360 | 16944260 ~ 16945763 (-) |
| lrit3a | LOC106604555 | coding | upstream | 32587 | 17324942 ~ 17334173 (-) |
| gpm6aa | gpm6a | coding | upstream | 45040 | 17337395 ~ 17354719 (-) |
| spata4 | spata4 | coding | upstream | 98054 | 17390409 ~ 17395524 (-) |
| asb5a | LOC101464329 | coding | upstream | 103316 | 17395671 ~ 17399280 (-) |
| aga | aga | coding | upstream | 120792 | 17413147 ~ 17418649 (-) |
| G1221673 | NA | non-coding | downstream | 46016 | 17245887 ~ 17246107 (-) |
| G1221639 | NA | non-coding | downstream | 79152 | 17212516 ~ 17212971 (-) |
| G1221449 | NA | non-coding | downstream | 358379 | 16933502 ~ 16933744 (-) |
| G1221440 | NA | non-coding | downstream | 377284 | 16914206 ~ 16914839 (-) |
| G1221126 | NA | non-coding | downstream | 471519 | 16820166 ~ 16820604 (-) |
| G1221902 | NA | non-coding | upstream | 1395 | 17293750 ~ 17294055 (-) |
| G1221909 | NA | non-coding | upstream | 13172 | 17305527 ~ 17305838 (-) |
| G1221915 | NA | non-coding | upstream | 23299 | 17315654 ~ 17315937 (-) |
| G1221916 | NA | non-coding | upstream | 24215 | 17316570 ~ 17316827 (-) |
| G1221947 | NA | non-coding | upstream | 74825 | 17367180 ~ 17367429 (-) |
| G1219208 | NA | other | downstream | 1973963 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 2297744 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 2734742 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 3577246 | 13683784 ~ 13715500 (-) |
| G1216443 | NA | other | downstream | 4449370 | 12841496 ~ 12842753 (-) |
| G1225043 | LOC108238713 | other | upstream | 2543523 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 2841356 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 3029423 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 3173375 | 20465730 ~ 20470523 (-) |
