XLOC_031262 (si:ch211-284e13.14)


Basic Information

Item Value
gene id XLOC_031262
gene name si:ch211-284e13.14
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38104901 ~ 38107741 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060708
CATTtacatatgactgtcaacatctcaaaaaatgtgttttggtggttcgtgaccctttaaagtttgAGACCATTTGAGGGagaatgcatttttgtttttgagtgatCTATTTCTTTAATTCTTAACATCCTTTTAAATGTAACAGGTGTTTATTGACTTCAAGAGTTTCAAAGAACTGGAGATGTAGAGATAATGATGTCACAAACCTCTAGAGTAAACACAGGACTTTCCAGCACTGTGGGCTGTCCCTGTTGATTAACGCAGTCACACTTTCATTCCTTTACAGAACTGCTTAACAACGCAGCACAGCACACGTTTACAGTGAGGATTAATAAATAATCCTACTCAAACTGATCAAATGAGAACTACTAGAAGAAccaagaaaaacacaaaaaaggaaGAACCACAAAGAGAGACGGTCATACAGTGGTGCCCGGGAGGAACAACAACAATGGGAGCTGGAAATTCACAGGTGAACAACAATCCAACTACTGTCCTCAGCCAGGATGGAAAAAGTTTAATGGTGCCTTCTCTAATGATTCGAACACTACTAGTACCGCACAACCCTGTCAACACCTCTGCATCTCCGAATGATGGACAAAATCCAGATCCAGCAAGAACATGCCCTGTTTGTTTGTCTGCGCTGAATCCTGCACGCATGAATGGCCAATCTAATGATGAACTGCTTCAATGTCCACGATGCTCCATCCTGTGTGGTTCTTGTCTTTACCCCTGCACTTCTGCCGTCTGCACCAACAAGCTGTGTGCGCTGGTCTCCACACTGCTGACCTGTGACGTGGTGACAGATCCAACGAGTAGAGTGTTTGGTTGTCCAATATTCAGAGCCTGTCCCAAGTGTTACAGTCTGATTATGCATGAAGGCCATGGATGCAAGCATGTAAGATGCAAATCATGCCATCACCGGTTCTGTTTTATCTGTTTGCAAGGTGACTGTAGCAAAGACAAAGCACTTTACTGGACACTAACTTGTGCAAAGCAGAGAGCAAAAAGGCAGAGATTTATGTCAACAGAATCTTGAATTTAGATTCATCATTGGAATGGactcaaaaatgacaaaactCAAGAACTGTCAGTTGAGCTGCTGTGCAGGAATTAAATCCTGAAATCTTGGATAACAGTCCTGGAGAAGTGACACTACAGACTTCTGTGTACAATATTATTAGCAAAGCTTTCTATACGCTTTCTCATACTAGGAGCCGGTTACTGTTTTTCTACCTAAAATGACTGCAACATTGTCGTGTAGCAATATAGAAAGACACAGCCTTCTATTCATCAAGAAATAAAGCATCCGATGTGTGTAGCACTGA
>TCONS_00061542
GCACAACCCTGTCAACACCTCTGCATCTCCGAATGATGGACAAAATCCAGATCCAGCAAGAACATGCCCTGTTTGTTTGTCTGCGCTGAATCCTGCACGCATGAATGGCCAATCTAATGATGAACTGCTTCAATGTCCACGATGCTCCATCCTGTGTGGTTCTTGTCTTTACCCCTGCACTTCTGCCGTCTGCACCAACAAGCTGTGTGCGCTGGTCTC

Function

symbol description
si:ch211-284e13.14 Predicted to enable metal ion binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097952

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060708 False 1328 mRNA 0.42 4 38104901 38107741
TCONS_00061542 True 219 lncRNA 0.51 2 38105452 38106799

Neighbor

gene id symbol gene type direction distance location
XLOC_031261 si:ch211-284e13.4 coding downstream 10771 38088594 ~ 38094130 (-)
XLOC_031260 si:dkey-111e8.5 coding downstream 40836 38060959 ~ 38064065 (-)
XLOC_031259 BX640520.1 coding downstream 66684 38035337 ~ 38038217 (-)
XLOC_031258 si:ch211-139a5.1 coding downstream 107092 37981800 ~ 37997809 (-)
XLOC_031257 mpzl2b coding downstream 141138 37948283 ~ 37963763 (-)
XLOC_031263 si:ch211-284e13.6 coding upstream 2643 38110384 ~ 38122126 (-)
XLOC_031264 gucy2d coding upstream 15892 38123633 ~ 38161033 (-)
XLOC_031265 si:ch211-284e13.12 coding upstream 60069 38167810 ~ 38170996 (-)
XLOC_031266 si:ch211-284e13.11 coding upstream 68299 38176040 ~ 38179220 (-)
XLOC_031267 si:ch211-284e13.9 coding upstream 85712 38193453 ~ 38197080 (-)
XLOC_031251 NA non-coding downstream 393051 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 501166 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 621881 37480447 ~ 37483020 (-)
XLOC_031247 NA non-coding downstream 832590 37266944 ~ 37272311 (-)
XLOC_031269 NA non-coding upstream 142303 38250044 ~ 38255744 (-)
XLOC_031276 NA non-coding upstream 507127 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding upstream 513216 38620957 ~ 38622971 (-)
XLOC_031280 BX640512.1 non-coding upstream 589755 38697496 ~ 38705831 (-)
XLOC_031284 NA non-coding upstream 682991 38790732 ~ 38791845 (-)

Expression


Co-expression Network