Gene
RNA
| Item | Value |
|---|---|
| gene id | G1222602 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 18004264 ~ 18004390 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1395599 | True | 127 | lncRNA | 0.44 | 1 | 18004264 | 18004390 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489474 | NA | coding | downstream | 58372 | 17940927 ~ 17945892 (-) |
| LOC110488931 | pdgfc | coding | downstream | 226667 | 17704072 ~ 17777597 (-) |
| ctso | ctso | coding | downstream | 369683 | 17625840 ~ 17634581 (-) |
| aga | aga | coding | downstream | 585615 | 17413147 ~ 17418649 (-) |
| asb5a | LOC101464329 | coding | downstream | 604984 | 17395671 ~ 17399280 (-) |
| gask1b | fam198b | coding | upstream | 163 | 18004553 ~ 18013741 (-) |
| LOC110488938 | LOC106604531 | coding | upstream | 220878 | 18225268 ~ 18230133 (-) |
| LOC110487745 | NA | coding | upstream | 236289 | 18240679 ~ 18242800 (-) |
| LOC110488940 | LOC106604535 | coding | upstream | 579990 | 18584380 ~ 18774367 (-) |
| LOC110487747 | anxa5 | coding | upstream | 1139740 | 19144130 ~ 19164344 (-) |
| G1222513 | NA | non-coding | downstream | 56192 | 17947679 ~ 17948072 (-) |
| G1222498 | NA | non-coding | downstream | 67510 | 17936545 ~ 17936754 (-) |
| G1222489 | NA | non-coding | downstream | 73662 | 17930090 ~ 17930602 (-) |
| G1222482 | NA | non-coding | downstream | 81545 | 17922399 ~ 17922719 (-) |
| G1222473 | NA | non-coding | downstream | 87253 | 17916777 ~ 17917011 (-) |
| G1222629 | NA | non-coding | upstream | 28988 | 18033378 ~ 18033747 (-) |
| G1222653 | NA | non-coding | upstream | 43997 | 18048387 ~ 18048644 (-) |
| G1222656 | NA | non-coding | upstream | 46580 | 18050970 ~ 18051227 (-) |
| G1222957 | LOC106604530 | non-coding | upstream | 173285 | 18177675 ~ 18179078 (-) |
| G1222974 | NA | non-coding | upstream | 192508 | 18196898 ~ 18197756 (-) |
| G1219208 | NA | other | downstream | 2686104 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 3009885 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 3446883 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 4289387 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 1831488 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 2129321 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 2317388 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 2461340 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 2718647 | 20723037 ~ 20723236 (-) |
