Gene
RNA
| Item | Value |
|---|---|
| gene id | G1223918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 18560746 ~ 18561055 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1397038 | True | 310 | lncRNA | 0.52 | 1 | 18560746 | 18561055 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487745 | NA | coding | downstream | 317946 | 18240679 ~ 18242800 (-) |
| LOC110488938 | LOC106604531 | coding | downstream | 330613 | 18225268 ~ 18230133 (-) |
| gask1b | fam198b | coding | downstream | 547005 | 18004553 ~ 18013741 (-) |
| LOC110489474 | NA | coding | downstream | 614854 | 17940927 ~ 17945892 (-) |
| LOC110488931 | pdgfc | coding | downstream | 783149 | 17704072 ~ 17777597 (-) |
| LOC110488940 | LOC106604535 | coding | upstream | 23325 | 18584380 ~ 18774367 (-) |
| LOC110487747 | anxa5 | coding | upstream | 583075 | 19144130 ~ 19164344 (-) |
| LOC110488948 | ccna2 | coding | upstream | 629186 | 19190241 ~ 19195081 (-) |
| bbs7 | bbs7 | coding | upstream | 636469 | 19197524 ~ 19203622 (-) |
| tmem33 | LOC106604543 | coding | upstream | 642723 | 19203778 ~ 19211568 (-) |
| G1223916 | NA | non-coding | downstream | 792 | 18559754 ~ 18559954 (-) |
| G1223241 | NA | non-coding | downstream | 65089 | 18495350 ~ 18495657 (-) |
| G1223189 | NA | non-coding | downstream | 101497 | 18459048 ~ 18459249 (-) |
| G1223165 | NA | non-coding | downstream | 112313 | 18448183 ~ 18448433 (-) |
| G1223164 | NA | non-coding | downstream | 113285 | 18447198 ~ 18447461 (-) |
| G1223920 | NA | non-coding | upstream | 1830 | 18562885 ~ 18563615 (-) |
| G1223926 | NA | non-coding | upstream | 9073 | 18570128 ~ 18570384 (-) |
| G1223927 | NA | non-coding | upstream | 9970 | 18571025 ~ 18571346 (-) |
| G1223942 | NA | non-coding | upstream | 29544 | 18590599 ~ 18595648 (-) |
| G1224079 | NA | non-coding | upstream | 238219 | 18799274 ~ 18802232 (-) |
| asb5a | LOC101464329 | other | downstream | 1161511 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 3242586 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 3566367 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 4003365 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 4845869 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 1274823 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 1572656 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 1760723 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 1904675 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 2161982 | 20723037 ~ 20723236 (-) |
