Gene
RNA
| Item | Value |
|---|---|
| gene id | G1224144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 18908195 ~ 18913089 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1397282 | True | 243 | lncRNA | 0.44 | 2 | 18908195 | 18913089 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488940 | LOC106604535 | coding | downstream | 133828 | 18584380 ~ 18774367 (-) |
| LOC110487745 | NA | coding | downstream | 665395 | 18240679 ~ 18242800 (-) |
| LOC110488938 | LOC106604531 | coding | downstream | 678062 | 18225268 ~ 18230133 (-) |
| gask1b | fam198b | coding | downstream | 894454 | 18004553 ~ 18013741 (-) |
| LOC110489474 | NA | coding | downstream | 962303 | 17940927 ~ 17945892 (-) |
| LOC110487747 | anxa5 | coding | upstream | 231041 | 19144130 ~ 19164344 (-) |
| LOC110488948 | ccna2 | coding | upstream | 277152 | 19190241 ~ 19195081 (-) |
| bbs7 | bbs7 | coding | upstream | 284435 | 19197524 ~ 19203622 (-) |
| tmem33 | LOC106604543 | coding | upstream | 290689 | 19203778 ~ 19211568 (-) |
| LOC118938702 | NA | coding | upstream | 310685 | 19223774 ~ 19239151 (-) |
| G1224079 | NA | non-coding | downstream | 105963 | 18799274 ~ 18802232 (-) |
| G1223942 | NA | non-coding | downstream | 312547 | 18590599 ~ 18595648 (-) |
| G1223927 | NA | non-coding | downstream | 336849 | 18571025 ~ 18571346 (-) |
| G1223926 | NA | non-coding | downstream | 337811 | 18570128 ~ 18570384 (-) |
| G1223920 | NA | non-coding | downstream | 344580 | 18562885 ~ 18563615 (-) |
| G1224158 | NA | non-coding | upstream | 27654 | 18940743 ~ 18945434 (-) |
| G1224150 | NA | non-coding | upstream | 43146 | 18956235 ~ 18959273 (-) |
| G1224182 | NA | non-coding | upstream | 77489 | 18990578 ~ 18990819 (-) |
| G1224181 | NA | non-coding | upstream | 78078 | 18991167 ~ 18992894 (-) |
| G1224185 | NA | non-coding | upstream | 82370 | 18995459 ~ 18995803 (-) |
| asb5a | LOC101464329 | other | downstream | 1508960 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 3590035 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 3913816 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 4350814 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 5193318 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 922789 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 1220622 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 1408689 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 1552641 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 1809948 | 20723037 ~ 20723236 (-) |
