G1224240


Basic Information

Item Value
gene id G1224240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 19066584 ~ 19067325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1397389
TAGTTTCTAAAATAGTCAGAGTTGTTGAATACTAACACTAGTTTCTAAAATAGTCAGAGTTGCTGAATACTAACAATAGTTTCTAAAATAGTCAGAGTTGTTGAATACTAACACTAGTTTCTAAAATAAATCAGAGTTGCTGAATACTAACACTAGTTTCTAAAATAAATCAGAGTTGCTAGGTACTGTAGTGAGAGGGGGGCTAATAAGTAAAGGACTTGAGAAAAGATAATGGAAGTCTCTCTCTATGCAGGGTGCTTTTGCTTTTTCTTCTTCCAAAaggcattctattccctatatagcctaGTGCAAAGTAGAGCATATGGTGCCATTGCGGATGCATGATCAAAGTGCATTACACAAACAATATTGTACTGTATCTCATCTGTAGAAATTGCAAAATGTTTTCTAATAAATAGCAAACAGTTAAATAAACAGACATTCTGACACATTTCTATGTGAGTCTGTTTTCCTATGGGTTTTGAATGTTTGATCTATTGAGAAGAATCAGTGCATATTGTAAAATTTGGAGTGTGAGCTTCATGTCTGTGTTAGGACATTGAGATATTTTGAGTCACTCATAGGTGTGTACTgtatagtgtgtttgtgtgtgagtgttttgtgtgtgtgtgtgaacattgtgcactgaacaaaaatataaacgcaacatgtaaagtgttggtcccatgtttcatgagctgaaataaaag

Function

NR:

description
CREB-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1397389 True 710 lncRNA 0.34 2 19066584 19067325

Neighbor

gene id symbol gene type direction distance location
LOC110488940 LOC106604535 coding downstream 292217 18584380 ~ 18774367 (-)
LOC110487745 NA coding downstream 823784 18240679 ~ 18242800 (-)
LOC110488938 LOC106604531 coding downstream 836451 18225268 ~ 18230133 (-)
gask1b fam198b coding downstream 1052843 18004553 ~ 18013741 (-)
LOC110489474 NA coding downstream 1120692 17940927 ~ 17945892 (-)
LOC110487747 anxa5 coding upstream 76805 19144130 ~ 19164344 (-)
LOC110488948 ccna2 coding upstream 122916 19190241 ~ 19195081 (-)
bbs7 bbs7 coding upstream 130199 19197524 ~ 19203622 (-)
tmem33 LOC106604543 coding upstream 136453 19203778 ~ 19211568 (-)
LOC118938702 NA coding upstream 156449 19223774 ~ 19239151 (-)
G1224185 NA non-coding downstream 70781 18995459 ~ 18995803 (-)
G1224181 NA non-coding downstream 73690 18991167 ~ 18992894 (-)
G1224182 NA non-coding downstream 75765 18990578 ~ 18990819 (-)
G1224150 NA non-coding downstream 107311 18956235 ~ 18959273 (-)
G1224158 NA non-coding downstream 121150 18940743 ~ 18945434 (-)
G1224305 NA non-coding upstream 109679 19177004 ~ 19177610 (-)
G1224306 NA non-coding upstream 112280 19179605 ~ 19179945 (-)
G1224308 LOC106613263 non-coding upstream 114297 19181622 ~ 19181945 (-)
G1224320 NA non-coding upstream 153342 19220667 ~ 19309671 (-)
G1224344 NA non-coding upstream 185080 19252405 ~ 19308550 (-)
asb5a LOC101464329 other downstream 1667349 17395671 ~ 17399280 (-)
G1219208 NA other downstream 3748424 15317793 ~ 15318160 (-)
G1218808 NA other downstream 4072205 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 4509203 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 5351707 13683784 ~ 13715500 (-)
G1225043 LOC108238713 other upstream 768553 19835878 ~ 19836319 (-)
G1225499 NA other upstream 1066386 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 1254453 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 1398405 20465730 ~ 20470523 (-)
G1225875 NA other upstream 1655712 20723037 ~ 20723236 (-)

Expression


Co-expression Network