Gene
RNA
| Item | Value |
|---|---|
| gene id | G1224534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 19500598 ~ 19500829 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1397727 | True | 232 | lncRNA | 0.50 | 1 | 19500598 | 19500829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| limch1b | LOC106604545 | coding | downstream | 71553 | 19283198 ~ 19429045 (-) |
| LOC118938702 | NA | coding | downstream | 261447 | 19223774 ~ 19239151 (-) |
| tmem33 | LOC106604543 | coding | downstream | 289030 | 19203778 ~ 19211568 (-) |
| bbs7 | bbs7 | coding | downstream | 296976 | 19197524 ~ 19203622 (-) |
| LOC110488948 | ccna2 | coding | downstream | 305517 | 19190241 ~ 19195081 (-) |
| LOC118938704 | NA | coding | upstream | 220131 | 19720960 ~ 19722934 (-) |
| LOC110488956 | LOC106604549 | coding | upstream | 237378 | 19738207 ~ 19753902 (-) |
| LOC110488957 | LOC100136484 | coding | upstream | 255176 | 19756005 ~ 19771671 (-) |
| LOC110488958 | trpc3 | coding | upstream | 288957 | 19789786 ~ 19845909 (-) |
| LOC110488960 | LOC106604553 | coding | upstream | 447539 | 19948368 ~ 19960700 (-) |
| G1224320 | NA | non-coding | downstream | 190927 | 19220667 ~ 19309671 (-) |
| G1224344 | NA | non-coding | downstream | 192048 | 19252405 ~ 19308550 (-) |
| G1224308 | LOC106613263 | non-coding | downstream | 318653 | 19181622 ~ 19181945 (-) |
| G1224306 | NA | non-coding | downstream | 320653 | 19179605 ~ 19179945 (-) |
| G1224305 | NA | non-coding | downstream | 322988 | 19177004 ~ 19177610 (-) |
| G1224547 | NA | non-coding | upstream | 6180 | 19507009 ~ 19507209 (-) |
| G1224564 | NA | non-coding | upstream | 18250 | 19519079 ~ 19519366 (-) |
| G1224930 | NA | non-coding | upstream | 148297 | 19649126 ~ 19649978 (-) |
| G1224932 | NA | non-coding | upstream | 150331 | 19651160 ~ 19651972 (-) |
| G1224950 | NA | non-coding | upstream | 169755 | 19670584 ~ 19671049 (-) |
| asb5a | LOC101464329 | other | downstream | 2101363 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 4182438 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 4506219 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 4943217 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 5785721 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 335049 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 632882 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 820949 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 964901 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 1222208 | 20723037 ~ 20723236 (-) |
