Gene
RNA
| Item | Value |
|---|---|
| gene id | G1224969 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 19697019 ~ 19697383 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1398188 | True | 365 | lncRNA | 0.35 | 1 | 19697019 | 19697383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| limch1b | LOC106604545 | coding | downstream | 267974 | 19283198 ~ 19429045 (-) |
| LOC118938702 | NA | coding | downstream | 457868 | 19223774 ~ 19239151 (-) |
| tmem33 | LOC106604543 | coding | downstream | 485451 | 19203778 ~ 19211568 (-) |
| bbs7 | bbs7 | coding | downstream | 493397 | 19197524 ~ 19203622 (-) |
| LOC110488948 | ccna2 | coding | downstream | 501938 | 19190241 ~ 19195081 (-) |
| LOC118938704 | NA | coding | upstream | 23577 | 19720960 ~ 19722934 (-) |
| LOC110488956 | LOC106604549 | coding | upstream | 40824 | 19738207 ~ 19753902 (-) |
| LOC110488957 | LOC100136484 | coding | upstream | 58622 | 19756005 ~ 19771671 (-) |
| LOC110488958 | trpc3 | coding | upstream | 92403 | 19789786 ~ 19845909 (-) |
| LOC110488960 | LOC106604553 | coding | upstream | 250985 | 19948368 ~ 19960700 (-) |
| G1224968 | NA | non-coding | downstream | 569 | 19696082 ~ 19696450 (-) |
| G1224961 | NA | non-coding | downstream | 10916 | 19685816 ~ 19686103 (-) |
| G1224958 | NA | non-coding | downstream | 19068 | 19677749 ~ 19677951 (-) |
| G1224950 | NA | non-coding | downstream | 25970 | 19670584 ~ 19671049 (-) |
| G1224932 | NA | non-coding | downstream | 45047 | 19651160 ~ 19651972 (-) |
| G1225011 | NA | non-coding | upstream | 79619 | 19777002 ~ 19777276 (-) |
| G1225034 | NA | non-coding | upstream | 118920 | 19816303 ~ 19816593 (-) |
| G1225035 | NA | non-coding | upstream | 119291 | 19816674 ~ 19817082 (-) |
| G1225037 | NA | non-coding | upstream | 124838 | 19822221 ~ 19822475 (-) |
| G1225038 | NA | non-coding | upstream | 126227 | 19823610 ~ 19823830 (-) |
| asb5a | LOC101464329 | other | downstream | 2297784 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 4378859 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 4702640 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 5139638 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 5982142 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 138495 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 436328 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 624395 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 768347 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 1025654 | 20723037 ~ 20723236 (-) |
