XLOC_031276


Basic Information

Item Value
gene id XLOC_031276
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38614868 ~ 38633719 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062051
GTGAACTCATAATCTTTTATTAGAGTCTTTACTAAAAGATTCTTGCCAGACAAGATCTTTTGGTATATAAAGTCCTTTTCTTTTTTGACCCATACACAGTATAAAACAAACATACTGTAACAAATCAAAACTGTAAAAGGCTAAGCAAAGCAATTAGCAATAAAGCACGAGTTACTCAAAAggcattttgtcatcatttatagTAACATTTAAACATACAATAGTTAGAATCAATAATATTCACTCACCATAACTTGCATACTGTAATTACTAAAAGTAATCTAGTTTGGTGTTTTTAGAAATGAAATgaattttacaaatgtaaatatctaaataaagaCTTGGACAAATGCTGAAGACTGTAGTCATACTGTAAACAACAGTGTACAGCATATGCAGTATctatttttgcaaacaaaatggTTACATGGCACATGCACATACTAAAAAGTGTTTGTGAACTTCATGTATATTGTAATATATCACAAAAACCTTCAGTTTAATTCTCTTCATGCAGTTTATTATATGAAGCTTAGTAACAATTACTACTAAAATTCACAACTGCTGAGATTTTAGCTGCAAAGGGCtgttaaaatgctgcagtaaaaatcaATTTTGGATTTTGGAGCGAATTCAGAATTCACTGAATTCATTTATAGTTTTTCTCATCAGTTATGTAAAGTGTTTTATGCTACATGTaattttgtagaataaaatgttgtGTTTTACCATGATGGTTAGTATAGCCTGAAAGACACCTAtgcttatttagcttttttttctaaGCTGTTTGTAATTAGCTTTGGTTTATCATTTGACTTTTATATATTAGTGTTTCAATAACTTATGAGTTAGTGATTTATGGTGGTTTGTTGTTAAAGTTAAATCTGTAAAAGCTGAAAGTATGCTGCTATAATTATGCTCTTCTGGCAtccacagctgtcttttttttttcataaaaagtcattattttttagtgtaatttctttattcattttgatAGCTAGTATCTTAAAGAATAATATAGGATTAATCCAGCAATAGTGCCAAAAATGACAAAACCGATAAAAGCAAATGCAACACGATTTTTTCTGAAACAATCCACAATTCCATTAGATCCATCTTGTTGTCATCCTGGGTTTAAGGGAATTGCTTCTTCATCCTGATATGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062051 True 1172 lncRNA 0.30 2 38614868 38633719

Neighbor

gene id symbol gene type direction distance location
XLOC_031275 znhit1 coding downstream 3461 38604877 ~ 38611407 (-)
XLOC_031274 CR854980.1 coding downstream 81007 38517486 ~ 38533861 (-)
XLOC_031273 atp1b2b coding downstream 107887 38475531 ~ 38506981 (-)
XLOC_031272 chrne coding downstream 163786 38440099 ~ 38451082 (-)
XLOC_031271 pld2 coding downstream 176255 38388443 ~ 38438613 (-)
XLOC_031278 si:ch211-271e10.1 coding upstream 8214 38641933 ~ 38645353 (-)
XLOC_031279 BX640512.3 coding upstream 52327 38686046 ~ 38711506 (-)
XLOC_031280 BX640512.1 coding upstream 63777 38697496 ~ 38705831 (-)
XLOC_031281 BX640512.4 coding upstream 99142 38732861 ~ 38762414 (-)
XLOC_031282 si:dkey-58f10.4 coding upstream 138060 38771779 ~ 38777852 (-)
XLOC_031269 NA non-coding downstream 359124 38250044 ~ 38255744 (-)
XLOC_031259 BX640520.1 non-coding downstream 576651 38035337 ~ 38038217 (-)
XLOC_031251 NA non-coding downstream 903018 37708702 ~ 37711850 (-)
XLOC_031250 NA non-coding downstream 1011133 37592276 ~ 37603735 (-)
XLOC_031249 NA non-coding downstream 1131848 37480447 ~ 37483020 (-)
XLOC_031284 NA non-coding upstream 157013 38790732 ~ 38791845 (-)
XLOC_031285 BX640512.5 non-coding upstream 164485 38798204 ~ 38798318 (-)
XLOC_031286 BX571800.1 non-coding upstream 258903 38892622 ~ 38892759 (-)
XLOC_031287 BX571800.2 non-coding upstream 396092 39029811 ~ 39029925 (-)

Expression


Co-expression Network