Gene
RNA
| Item | Value |
|---|---|
| gene id | G1225174 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20012015 ~ 20012477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: TBC1 domain family member 30-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1398416 | True | 463 | TUCP | 0.64 | 1 | 20012015 | 20012477 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488959 | LOC106604552 | coding | upstream | 71001 | 19898094 ~ 19941014 (+) |
| LOC110488955 | pigg | coding | upstream | 363140 | 19529318 ~ 19648875 (+) |
| LOC110488954 | LOC106604547 | coding | upstream | 538665 | 19446119 ~ 19473350 (+) |
| trnav-uac-20 | NA | coding | upstream | 684436 | 19327504 ~ 19327579 (+) |
| phox2bb | phox2b | coding | upstream | 729380 | 19279607 ~ 19282635 (+) |
| LOC110488963 | clic2 | coding | downstream | 173594 | 20186071 ~ 20191531 (+) |
| LOC110488964 | LOC106604434 | coding | downstream | 187851 | 20200328 ~ 20202340 (+) |
| LOC110488965 | LOC106604435 | coding | downstream | 203723 | 20216200 ~ 20253685 (+) |
| tmem255a | LOC106604438 | coding | downstream | 262505 | 20274982 ~ 20295212 (+) |
| LOC110488973 | nkap | coding | downstream | 296160 | 20308619 ~ 20314136 (+) |
| G1225172 | NA | non-coding | upstream | 1423 | 20010365 ~ 20010592 (+) |
| G1225168 | NA | non-coding | upstream | 8493 | 20003281 ~ 20003522 (+) |
| G1225159 | NA | non-coding | upstream | 21698 | 19990112 ~ 19990317 (+) |
| G1225155 | NA | non-coding | upstream | 23618 | 19988179 ~ 19988397 (+) |
| G1224835 | NA | non-coding | upstream | 44499 | 19967031 ~ 19967516 (+) |
| G1225175 | NA | non-coding | downstream | 603 | 20013080 ~ 20013288 (+) |
| G1225197 | NA | non-coding | downstream | 32751 | 20045228 ~ 20045458 (+) |
| G1225201 | NA | non-coding | downstream | 39335 | 20051812 ~ 20052093 (+) |
| G1225179 | NA | non-coding | downstream | 42050 | 20054527 ~ 20076910 (+) |
| G1225220 | NA | non-coding | downstream | 86157 | 20098634 ~ 20098888 (+) |
| G1225173 | NA | other | upstream | 482 | 20011030 ~ 20011533 (+) |
| LOC110488935 | LOC106604530 | other | upstream | 1816007 | 18104635 ~ 18196487 (+) |
| G1222640 | NA | other | upstream | 1970366 | 18041345 ~ 18041649 (+) |
| G1219625 | NA | other | upstream | 4395039 | 15615929 ~ 15616976 (+) |
| G1225840 | NA | other | downstream | 683195 | 20695672 ~ 20696137 (+) |
| G1228466 | LOC100136012 | other | downstream | 2840838 | 22853315 ~ 22853661 (+) |
| shisa3 | shisa3 | other | downstream | 3604246 | 23616713 ~ 23622863 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 4435823 | 24448300 ~ 24458335 (+) |
