Gene
RNA
| Item | Value |
|---|---|
| gene id | G1225440 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20027636 ~ 20027874 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1398710 | True | 239 | lncRNA | 0.47 | 1 | 20027636 | 20027874 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488960 | LOC106604553 | coding | downstream | 66936 | 19948368 ~ 19960700 (-) |
| LOC110488958 | trpc3 | coding | downstream | 181727 | 19789786 ~ 19845909 (-) |
| LOC110488957 | LOC100136484 | coding | downstream | 255965 | 19756005 ~ 19771671 (-) |
| LOC110488956 | LOC106604549 | coding | downstream | 273734 | 19738207 ~ 19753902 (-) |
| LOC118938704 | NA | coding | downstream | 304702 | 19720960 ~ 19722934 (-) |
| LOC118938705 | NA | coding | upstream | 87651 | 20115525 ~ 20130254 (-) |
| LOC110488962 | LOC106604433 | coding | upstream | 107305 | 20135091 ~ 20165062 (-) |
| mcts1 | tma20 | coding | upstream | 178379 | 20206253 ~ 20215508 (-) |
| LOC110488967 | LOC106604437 | coding | upstream | 238110 | 20265984 ~ 20273649 (-) |
| zbtb33 | LOC106604440 | coding | upstream | 276500 | 20304374 ~ 20308443 (-) |
| G1225436 | NA | non-coding | downstream | 6859 | 20020548 ~ 20020777 (-) |
| G1225429 | NA | non-coding | downstream | 15159 | 20012276 ~ 20012477 (-) |
| G1225129 | NA | non-coding | downstream | 60719 | 19966693 ~ 19966917 (-) |
| G1225038 | NA | non-coding | downstream | 203806 | 19823610 ~ 19823830 (-) |
| G1225037 | NA | non-coding | downstream | 205161 | 19822221 ~ 19822475 (-) |
| G1225444 | NA | non-coding | upstream | 2912 | 20030786 ~ 20031085 (-) |
| G1225418 | NA | non-coding | upstream | 44332 | 20072206 ~ 20076910 (-) |
| G1225474 | NA | non-coding | upstream | 67541 | 20095415 ~ 20095624 (-) |
| G1225491 | NA | non-coding | upstream | 84501 | 20112375 ~ 20112644 (-) |
| G1225043 | LOC108238713 | other | downstream | 191317 | 19835878 ~ 19836319 (-) |
| asb5a | LOC101464329 | other | downstream | 2628401 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 4709476 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 5033257 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 5470255 | 14542673 ~ 14642681 (-) |
| G1225499 | NA | other | upstream | 105837 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 293904 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 437856 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 695163 | 20723037 ~ 20723236 (-) |
| LOC110488986 | LOC106604455 | other | upstream | 2200445 | 22228319 ~ 22233369 (-) |
