XLOC_031278 (si:ch211-271e10.1)


Basic Information

Item Value
gene id XLOC_031278
gene name si:ch211-271e10.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38641933 ~ 38645353 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060732
GCAGGATGAAGCATTTGTGAATCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGTTGTAGCCAGTAGGGAACAAAATCGGATCCCTGAACCACAACCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGACTTAATAATAAATGGAAGAGTCCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGTCCTCTCAGAAGAATGAGAGAACAGCAGGACGACATTGTTAATCTCCAGAACCCTCCTCTCCGGCAACCTCGGCCTGGTCCACCGCCTACCTACATTCGCAGGACGGTGGTGGGCAGCATTGGAGATTTTGCACGCCATTGATGAGGAGCCTGAAAGATCAGCCTCAAAGATGAACAAAGAAATCAATAAAGAGATTTTTAAACA
>TCONS_00060733
TGCTTTACAGTGTGTTTGCCATCGTCATCAGTGTCTATCGATCTTCTACTTCTTCTGTTTCGTCATTGCGTTTGTCACCAGCATGTCGACCATTGATTTTAACCATCTTTCCAACCTGATTCCTGCCTCTCTGTCACCTGAGAGCGCAGAAGAGCTCGCCAGAGCCCTCTCCACCGGCCGCTGGTGGGCTATCATGGAGGTTTTACACCCCATCGATGAGGAGCGTCAGTTTGACTTCACTTCAGGTCACCAGAGTCAAACTGTGGAGAGAGTTTTCTGCGTCTGGTCCAGCAGAGACAGCAGATGCGTCCTCCGTCCCTGAGGCCTCAGATGAGCTCGCCACTGCCCTCGCTGCAGGGGCCATTATGGAGGTTGAGCGCCCTATTGAGGAGCCTCAGGTTGACATCTCCTCGGTGCCGTTTTTGGAGGCACCAGAAACATCACCAGGAGCCTCTGTGCCTGAGAACGGGGAACCCACTACATCCCCAGTCCTCAAGAGCCAGATAGAGCCGCCTGGAGCTCCCGTATATGCCGAGTCTGACACCCCGGGCTACCTCTTTTTCGGAAATCAAAACCCCACGCCTGCTGAGCCAACTTTGGCCCCACCTGTGTCTTCTGTCAATGGAGACGTGTTTCAGATGGTTTCAGCGGAGCCTAAAGATTATAAAAGATTTCGAAGAGTTTCGAGGTGTCGCCGGTCTCCTACTATGCTGAAGATAAGAGAGGCATGGCTTAAAGAATTTGCCAAACACATGCCTCTTCAGAACCAGCAGCATGTGGAGGTTGTAGCCAGTAGGGGACAAAATCGGATCCCTGAACCACAACCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGGGATTTAGTAATAAATGGAAGAGTGCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGCCCTCTCAGAAGAATGAGAGAACAGCAGGATGAAGCATTTGTGAATCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGTTGTAGCCAGTAGGGAACAAAATCGGATCCCTGAACCACAACCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGACTTAATAATAAATGGAAGAGTCCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGTCCTCTCAGAAGAATGAGAGAACAGCAGGATGAAGCATTTGTGAATCAGATGCCTCATCAAAACCAGCAGCATGTGGAGGTTGTAGCCAGTAGGGGACAAAATCGGATCCCTGAACCACAACCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGATTTAGTAATAAATGGAAGAGTCTGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGCCCTCTCAGAAGAATGAGAGAACAGCAGGACGACATTGTTAATCTCCAGAACCCTCCTCTCCGGCAACCTCGGCCTGGTCCACCGCCTACCTACATTCGCAGGACGGTGGTGGGCAGCATTGGAGATTTTGCACGCCATTGATGAGGAGCCTGAAAGATCAGCCTCAAAGATGAACAAAGAAATCAA
>TCONS_00060734
GTCATTGCGTTTGTCACCAGCATGTCGACCATTGATTTTAACCATCTTTCCAACCTGATTCCTGCCTCTCTGTCACCTGAGAGCGCAGAAGAGCTCGCCAGAGCCCTCTCCACCGGCCGCTGGTGGGCTATCATGGAGGTTTTACACCCCATCGATGAGGAGCGTCAGTTTGACTTCACTTCAGGTCACCAGAGTCAAACTGTGGAGGATGACAGAGAGTTTTCTGCGTCTGGTCCAGCAGAGACAGCAGATGCGTCCTCCGTCCCTGAGGCCTCAGATGAGCTCGCCACTGCCCTCGCTGCAGGGGCCATTATGGAGGTTGAGCGCCCTATTGAGGAGCCTCAGGTTGACATCTCCTCGGTGCCGTTTTTGGAGGCACCAGAAACATCACCAGGAGCCTCTGTGCCTGAGAACGGGGAACCCACTACATCCCCAGTCCTCAAGAGCCAGATAGAGCCGCCTGGAGCTCCCGTATATGCCGAGTCTGACACCCCGGGCTACCTCTTTTTCGGAAATCAAAACCCCACGCCTGCTGAGCCAACTTTGGCCCCACCTGTGTCTTCTGTCAATGGAGACGTGTTTCAGATGGTTTCAGCGGAGCCTAAAGATTATAAAAGATTTCGAAGAGTTTCGAGGTGTCGCCGGTCTCCTACTATGCTGAAGATAAGAGAGGCATG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-145 No description available

Ensembl:

ensembl_id ENSDARG00000095735

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060732 False 403 mRNA 0.49 2 38641933 38643188
TCONS_00060733 False 1556 mRNA 0.51 7 38641951 38645353
TCONS_00060734 True 677 mRNA 0.55 3 38644385 38645292

Neighbor

gene id symbol gene type direction distance location
XLOC_031276 NA coding downstream 8214 38614868 ~ 38633719 (-)
XLOC_031277 NA coding downstream 18962 38620957 ~ 38622971 (-)
XLOC_031275 znhit1 coding downstream 30526 38604877 ~ 38611407 (-)
XLOC_031274 CR854980.1 coding downstream 108072 38517486 ~ 38533861 (-)
XLOC_031273 atp1b2b coding downstream 134952 38475531 ~ 38506981 (-)
XLOC_031279 BX640512.3 coding upstream 40693 38686046 ~ 38711506 (-)
XLOC_031280 BX640512.1 coding upstream 52143 38697496 ~ 38705831 (-)
XLOC_031281 BX640512.4 coding upstream 87508 38732861 ~ 38762414 (-)
XLOC_031282 si:dkey-58f10.4 coding upstream 126426 38771779 ~ 38777852 (-)
XLOC_031283 cnot6l coding upstream 141128 38786481 ~ 38824466 (-)
XLOC_031269 NA non-coding downstream 386189 38250044 ~ 38255744 (-)
XLOC_031259 BX640520.1 non-coding downstream 603716 38035337 ~ 38038217 (-)
XLOC_031251 NA non-coding downstream 930083 37708702 ~ 37711850 (-)
XLOC_031284 NA non-coding upstream 145379 38790732 ~ 38791845 (-)
XLOC_031285 BX640512.5 non-coding upstream 152851 38798204 ~ 38798318 (-)
XLOC_031286 BX571800.1 non-coding upstream 247269 38892622 ~ 38892759 (-)
XLOC_031287 BX571800.2 non-coding upstream 384458 39029811 ~ 39029925 (-)

Expression


Co-expression Network