XLOC_031279 (BX640512.3)


Basic Information

Item Value
gene id XLOC_031279
gene name BX640512.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38686046 ~ 38711506 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060735
TCTTACTCTCACAGTACACAGGCTGACAATGGCAGAGTTGACGTACACTGAGAAGTTCAGCAGCAGCTCACAGGATCTTCACTGTGTAATAAATGAGGAGATGAATATCAGACCATGGAAAGGTCGCTTGTGGAGTGAAAAGTGTTGCTTTGTTCTGATGGGTGGCACTATCATAATCGTCATGGCTTTGTTAACGGCAGTCTCTATAACCTTGAATCAACAATACAGTAAAATGACTGAGGTGGAGAACAAGGTGGTCAGTTTGGCATCATCTTTTGCTTTGCTTTCTTCAAACCAACAAGAAAtgaaacagCTGTATGGAAAACTCACTGAAGTAGGGAATGAGGTGGCCAATCTGACGTCAGGTTTTGCTTTGCTTTCTTCAGACCAACAAGAAAGAAATGACAGACTTATGGAGATGGTCAATGAACTTAAAGCTGATCTGGAGACCAGGATAGCAAATCTGACTCAGTATAAACCTGTTCTGAGATGTAAAGCAGGGTGGCAACATTTCCTATCCAACTGCTACCTGATGCCCAGCACTAAACTGACCTGGCCAAAGGCACGCTTATACTGTAATGGGATAGACAGCTTGCTGCTCATCCTGGGGAATGACAGCAGGGAGTGGGACTATTTTATGCAATACGCTATTCTTACATCTGAATCTTACTGGATTGGACTTACAGATTTAATTACCAGCCAGTGgagatggattgatggaaagCCATACGTCATGAACAGCAGtcattGGGAACCAGGAGAGCCTAATGATGTTTTAAACAAGGAAGACTGTGGGGAATTAACTGCATCTGGGAAGCTGAACGATGCCCAATGCTCAAAGTCTTTCCAATTTATCTGTAAAACACCAGCCACTGAAAACTAACCACTTTAAACAGTACATATCCTAAGACAAATGCAGAAGTCAAACAGTGGAAACTGCTTAATTCATTGGATTAAAAATGAAACGTCCCATTCTGATAGCTGAAGCCAATTCATTTTACAAGAGTGTTTTTTATATGCATAGAAAGAATATTAAACATCTATTTAGCATTcagcataacatttatttaaaattgatacAATACACTTATGACATGCAATagttaacataaaacaataagtgATCATATATTGTATAAGATTTTAAATGCTAGAAATTATCTTACTGATAAATGGGTAAAACTTCGTGGTTTTAAAGATAACAGCAAAgtgtaaaaatttaaaatgacaattcatTACCACAATGCACTGTAAACATGTAATCTTTTATTAGAGTCCTTAAATGACACTTGacagagaagatattttgacttATAAACTTCTTTTCTTCTTAGACTATAGAGGAATTACCCCGTTtataaacattcaggatgcgtgcgcagagaggttgcagaaaaaactTGGATCGCTAgaatttacagcgagggaatggcatctgatgcggtacagagtttctTGTATTaaagataagttatattgattacatatcatatatattatttacataatgctttcagcgtattataacagcttgtcaacCAGTGATAAGCACATTCTGCAAAATTAAGGATAAAGTGAGCGCCTATGTCTGACaagtccatttgcgatagcaccctcccaatggatattggataaaacacaatggccaagcatccagccccaaatatacaatctcattgaagctctaAGTGATTTTAcgagagagaagttaaaggcctacagtTTTGTTCGGTGTGGTTATGTGCAAGAAATAAttttccatgattaccagattcaaaactatgtagtaaTAAAAACCAAGGTTCTGCCTTTGCCAAAGACAAAGAAATAAGACGGAACTGTTCAAGGCCCGGGTAATAAATCATCAACAATTaaaacgactgcattctgacagcgaactgcacctgtacacTTTCACGTTTccttcttagcattcagtgtccgcagtttaattaaccatatttaactgtttttgctggaATCATTGCTGCTATCAAAACTACTAATGcatatgattcagcatagcacAAACTTTACCTGAtttgaaatgagaactgcagagtcgagcatttttaataGGTCCTAactccattcagctcccttttagccaaagacgtctgcggttggcattaaaatcagtgtggtgtatggtaaagtTTAAGATTTCTATTTTTGGATTTTCTattttggcatcctaccacaaaacaacatgtttgctattgcaattggtctctttttgcaaccgggagcccttgtgacgtcatgtgtgacgtaggttgatGATTCCTCTATGACAAACTTACTGTAACAATTCAAAACTGTAAAGGGCTGAGCAAAGCAATTAGCATAAAGCAAAAGTTactcaaaaaagcattttgtcaTCGTTCATAGTAATATTTAAAGACATAACAGAATGAATAATATCTTTTCACCATAACTAACATAATGTAATTACTAAAGCTAATCCAGTTTGGTATAAGTGTTTTTAGCAATGGAATTCCTTTTACAAACTTAAAGATCTAAATAAGGAGTTATGCGAAAATGCGAAAAAAAAGTGGTCATATCTGGGGTAAACAGCACAGCATGTATATTTCTGCAAACAAAATAGTTACATGCTACATGCAAATCCTAAAAAGTGTTTGTGAACTTCATGTGTATTGTAATACATCTCAAAAACACACTTACATTCACAGTTCAATTATCTTCATGCAGTGTGTTATATGAAGCTTAGTGACAATCACTGCTGAAATTCACTTCTAAAATTGTAATTAGCTTTGGGTTTATCATGTGACTTTCATATATTAGTGCTTTAATGAGTTGTTATTAGTGAATTCCGGTACtttgttaattaaatttaaatctgtaaaatctTACAAATTGCTCCTATAATTATGGTCTTCTGGCAtccacagctgtcttttttttctttttcagaaactgttatacttttttacagtgtcatttctgtaattatttatatCGTTAGTATCAACATGATGCCTTAAAACTGTCCAAAAAATAATGAAGCAAATGATGAGAATGATAATAACaatgagaaaaagaaaaataacacatttttttcgAATTCGGTGTCCTCCGGCTCCGATGGGCACAAGAGAATCTTCTCCATTCTGGTATGTACGTGGAATTCCATAATCTTTTGGAGAAAAATATGAAGCACATTTAATATAAGATACTAAAAAAATAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103480

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060735 True 3208 mRNA 0.36 8 38686046 38711506

Neighbor

gene id symbol gene type direction distance location
XLOC_031278 si:ch211-271e10.1 coding downstream 40693 38641933 ~ 38645353 (-)
XLOC_031276 NA coding downstream 52327 38614868 ~ 38633719 (-)
XLOC_031277 NA coding downstream 63075 38620957 ~ 38622971 (-)
XLOC_031275 znhit1 coding downstream 74639 38604877 ~ 38611407 (-)
XLOC_031274 CR854980.1 coding downstream 152185 38517486 ~ 38533861 (-)
XLOC_031281 BX640512.4 coding upstream 21355 38732861 ~ 38762414 (-)
XLOC_031282 si:dkey-58f10.4 coding upstream 60273 38771779 ~ 38777852 (-)
XLOC_031283 cnot6l coding upstream 74975 38786481 ~ 38824466 (-)
XLOC_031284 NA coding upstream 79226 38790732 ~ 38791845 (-)
XLOC_031285 BX640512.5 coding upstream 86698 38798204 ~ 38798318 (-)
XLOC_031269 NA non-coding downstream 430302 38250044 ~ 38255744 (-)
XLOC_031259 BX640520.1 non-coding downstream 647829 38035337 ~ 38038217 (-)
XLOC_031251 NA non-coding downstream 974196 37708702 ~ 37711850 (-)
XLOC_031286 BX571800.1 non-coding upstream 181116 38892622 ~ 38892759 (-)
XLOC_031287 BX571800.2 non-coding upstream 318305 39029811 ~ 39029925 (-)
XLOC_031288 NA non-coding upstream 330548 39042054 ~ 39045354 (-)

Expression


Co-expression Network