Gene
RNA
| Item | Value |
|---|---|
| gene id | G1225561 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20222958 ~ 20223257 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1398868 | True | 300 | lncRNA | 0.41 | 1 | 20222958 | 20223257 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mcts1 | tma20 | coding | downstream | 7450 | 20206253 ~ 20215508 (-) |
| LOC110488962 | LOC106604433 | coding | downstream | 57896 | 20135091 ~ 20165062 (-) |
| LOC118938705 | NA | coding | downstream | 92704 | 20115525 ~ 20130254 (-) |
| LOC110488960 | LOC106604553 | coding | downstream | 262258 | 19948368 ~ 19960700 (-) |
| LOC110488958 | trpc3 | coding | downstream | 377049 | 19789786 ~ 19845909 (-) |
| LOC110488967 | LOC106604437 | coding | upstream | 42727 | 20265984 ~ 20273649 (-) |
| zbtb33 | LOC106604440 | coding | upstream | 81117 | 20304374 ~ 20308443 (-) |
| ndufa1 | LOC106611562 | coding | upstream | 92372 | 20315512 ~ 20316866 (-) |
| sowahd | LOC106604443 | coding | upstream | 103469 | 20325473 ~ 20331673 (-) |
| LOC110488978 | ube2a | coding | upstream | 157647 | 20380904 ~ 20386061 (-) |
| G1225560 | NA | non-coding | downstream | 116 | 20222643 ~ 20222842 (-) |
| G1225558 | NA | non-coding | downstream | 3356 | 20219359 ~ 20219602 (-) |
| G1225548 | LOC106604435 | non-coding | downstream | 5773 | 20216536 ~ 20217185 (-) |
| G1225549 | NA | non-coding | downstream | 17058 | 20204941 ~ 20205900 (-) |
| G1225503 | NA | non-coding | downstream | 31427 | 20186104 ~ 20191531 (-) |
| G1225564 | NA | non-coding | upstream | 2137 | 20225394 ~ 20225618 (-) |
| G1225565 | LOC106604435 | non-coding | upstream | 2443 | 20225700 ~ 20226329 (-) |
| G1225567 | NA | non-coding | upstream | 5757 | 20229014 ~ 20229524 (-) |
| G1225571 | NA | non-coding | upstream | 13286 | 20236543 ~ 20236786 (-) |
| G1225512 | NA | non-coding | upstream | 14255 | 20237512 ~ 20239087 (-) |
| G1225499 | NA | other | downstream | 88905 | 20133711 ~ 20134053 (-) |
| G1225043 | LOC108238713 | other | downstream | 386639 | 19835878 ~ 19836319 (-) |
| asb5a | LOC101464329 | other | downstream | 2823723 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 4904798 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 5228579 | 14993820 ~ 14994379 (-) |
| G1225505 | upf3b | other | upstream | 98521 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 242473 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 499780 | 20723037 ~ 20723236 (-) |
| LOC110488986 | LOC106604455 | other | upstream | 2005062 | 22228319 ~ 22233369 (-) |
| G1229693 | znf518b | other | upstream | 3646701 | 23869958 ~ 23873564 (-) |
