Gene
RNA
| Item | Value |
|---|---|
| gene id | G1225514 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20277533 ~ 20308964 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1398819 | True | 348 | lncRNA | 0.46 | 2 | 20277533 | 20308964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488967 | LOC106604437 | coding | downstream | 3884 | 20265984 ~ 20273649 (-) |
| mcts1 | tma20 | coding | downstream | 62025 | 20206253 ~ 20215508 (-) |
| LOC110488962 | LOC106604433 | coding | downstream | 112471 | 20135091 ~ 20165062 (-) |
| LOC118938705 | NA | coding | downstream | 147279 | 20115525 ~ 20130254 (-) |
| LOC110488960 | LOC106604553 | coding | downstream | 316833 | 19948368 ~ 19960700 (-) |
| ndufa1 | LOC106611562 | coding | upstream | 6665 | 20315512 ~ 20316866 (-) |
| sowahd | LOC106604443 | coding | upstream | 17762 | 20325473 ~ 20331673 (-) |
| LOC110488978 | ube2a | coding | upstream | 71940 | 20380904 ~ 20386061 (-) |
| tnmd | LOC106604450 | coding | upstream | 167243 | 20476207 ~ 20564889 (-) |
| trnaa-ugc-63 | NA | coding | upstream | 398581 | 20707545 ~ 20707619 (-) |
| G1225576 | NA | non-coding | downstream | 1262 | 20276029 ~ 20276271 (-) |
| G1225575 | NA | non-coding | downstream | 2261 | 20274997 ~ 20275272 (-) |
| G1225517 | NA | non-coding | downstream | 16720 | 20258534 ~ 20260813 (-) |
| G1225512 | NA | non-coding | downstream | 38446 | 20237512 ~ 20239087 (-) |
| G1225571 | NA | non-coding | downstream | 40747 | 20236543 ~ 20236786 (-) |
| G1225615 | NA | non-coding | upstream | 81758 | 20390722 ~ 20391285 (-) |
| G1225726 | NA | non-coding | upstream | 289501 | 20598465 ~ 20598774 (-) |
| G1225750 | NA | non-coding | upstream | 315562 | 20624526 ~ 20624775 (-) |
| G1225499 | NA | other | downstream | 143480 | 20133711 ~ 20134053 (-) |
| G1225043 | LOC108238713 | other | downstream | 441214 | 19835878 ~ 19836319 (-) |
| asb5a | LOC101464329 | other | downstream | 2878298 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 4959373 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 5283154 | 14993820 ~ 14994379 (-) |
| G1225505 | upf3b | other | upstream | 12814 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 156766 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 414073 | 20723037 ~ 20723236 (-) |
| LOC110488986 | LOC106604455 | other | upstream | 1919355 | 22228319 ~ 22233369 (-) |
| G1229693 | znf518b | other | upstream | 3560994 | 23869958 ~ 23873564 (-) |
