Gene
RNA
| Item | Value |
|---|---|
| gene id | G1226108 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20998010 ~ 20998759 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1399442 | True | 204 | lncRNA | 0.39 | 2 | 20998010 | 20998759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pcdh19 | LOC106604451 | coding | upstream | 84789 | 20823043 ~ 20913221 (+) |
| elf1 | LOC106604448 | coding | upstream | 527474 | 20390733 ~ 20470536 (+) |
| trnae-uuc-6 | NA | coding | upstream | 607845 | 20390094 ~ 20390165 (+) |
| LOC110488977 | LOC106604447 | coding | upstream | 617289 | 20375493 ~ 20380721 (+) |
| LOC110488975 | LOC106604445 | coding | upstream | 623154 | 20332797 ~ 20374856 (+) |
| glra4a | LOC106604454 | coding | downstream | 1112301 | 22111060 ~ 22190415 (+) |
| gla | gla | coding | downstream | 1220900 | 22219659 ~ 22227024 (+) |
| btk | btk | coding | downstream | 1235175 | 22233934 ~ 22254573 (+) |
| timm8a | timm8a | coding | downstream | 1256260 | 22255019 ~ 22256391 (+) |
| mars2 | mars2 | coding | downstream | 1264329 | 22263088 ~ 22273849 (+) |
| G1225982 | NA | non-coding | upstream | 193196 | 20804504 ~ 20804814 (+) |
| G1225862 | NA | non-coding | upstream | 284017 | 20713760 ~ 20713993 (+) |
| G1225849 | NA | non-coding | upstream | 296886 | 20700804 ~ 20701124 (+) |
| G1225831 | NA | non-coding | upstream | 308320 | 20689465 ~ 20689690 (+) |
| G1225774 | NA | non-coding | upstream | 353100 | 20644693 ~ 20644910 (+) |
| G1226173 | NA | non-coding | downstream | 97941 | 21096700 ~ 21101944 (+) |
| G1226151 | NA | non-coding | downstream | 190285 | 21189044 ~ 21203201 (+) |
| G1226241 | LOC106613263 | non-coding | downstream | 219112 | 21217871 ~ 21218407 (+) |
| G1226268 | NA | non-coding | downstream | 277256 | 21276015 ~ 21276356 (+) |
| G1226337 | LOC106604453 | non-coding | downstream | 392262 | 21391021 ~ 21439603 (+) |
| G1225840 | NA | other | upstream | 301873 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 683900 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 985533 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 986477 | 20011030 ~ 20011533 (+) |
| phox2bb | phox2b | other | upstream | 1717076 | 19279607 ~ 19282635 (+) |
| G1228466 | LOC100136012 | other | downstream | 1854556 | 22853315 ~ 22853661 (+) |
| shisa3 | shisa3 | other | downstream | 2617964 | 23616713 ~ 23622863 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 3449541 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 4947953 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 4963698 | 25962457 ~ 25966312 (+) |
