G1227052


Basic Information

Item Value
gene id G1227052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 21189054 ~ 21202832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1400425
ttcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttcattatactactttctctctctcctctcttcattatactactttctctctcccctcttcattatactacttactctctctctcccctcttcattatactactttctctctcccctcttcattatacttctttctctcccctcttcattatactactttctctcttccctcttcattatactactttctctctctcctcttcattatactactttatctctctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctctcctcttcattatactactttctctccccctcttcattatactactttatctctctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttcattatactactttctctctctcctctcttcattatactactttctctctctcccctcttcattatactactttctctctcatcttcttcattatactactttctctctcccctcttcattatactactttctctctcccctcttcattataatactttctctcccccctcttcattatactactttctctctcatcttcttcattatactactttctctctcccccctcttcattatactactttctctctcccctcttcattatactactttctctctcccctcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1400425 True 897 lncRNA 0.38 3 21189054 21202832

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-63 NA coding downstream 481435 20707545 ~ 20707619 (-)
tnmd LOC106604450 coding downstream 624165 20476207 ~ 20564889 (-)
LOC110488978 ube2a coding downstream 802993 20380904 ~ 20386061 (-)
sowahd LOC106604443 coding downstream 857682 20325473 ~ 20331673 (-)
ndufa1 LOC106611562 coding downstream 872440 20315512 ~ 20316866 (-)
diaph2 LOC106604453 coding upstream 63295 21266127 ~ 21960003 (-)
LOC118938706 NA coding upstream 479883 21682715 ~ 21684822 (-)
trnat-ugu-36 NA coding upstream 610353 21813185 ~ 21813258 (-)
LOC110488986 LOC106604455 coding upstream 1025503 22228319 ~ 22233369 (-)
LOC118938775 NA coding upstream 1026953 22229785 ~ 22229921 (-)
G1226996 NA non-coding downstream 81430 21107151 ~ 21107624 (-)
G1225965 NA non-coding downstream 394021 20794832 ~ 20795033 (-)
G1225958 NA non-coding downstream 398317 20790516 ~ 20790737 (-)
G1225800 NA non-coding downstream 543247 20645521 ~ 20645807 (-)
G1225754 NA non-coding downstream 560313 20628490 ~ 20628741 (-)
G1227112 NA non-coding upstream 101564 21304396 ~ 21304745 (-)
G1227123 NA non-coding upstream 113390 21316222 ~ 21316545 (-)
G1227216 NA non-coding upstream 252260 21455092 ~ 21456134 (-)
G1227363 NA non-coding upstream 533186 21736018 ~ 21736355 (-)
G1227366 NA non-coding upstream 541750 21744582 ~ 21744812 (-)
G1225875 NA other downstream 465818 20723037 ~ 20723236 (-)
G1225647 LOC106604448 other downstream 718531 20465730 ~ 20470523 (-)
G1225505 upf3b other downstream 863835 20321778 ~ 20325219 (-)
G1225499 NA other downstream 1055001 20133711 ~ 20134053 (-)
G1225043 LOC108238713 other downstream 1352735 19835878 ~ 19836319 (-)
G1229693 znf518b other upstream 2667126 23869958 ~ 23873564 (-)
LOC110489025 LOC106604425 other upstream 3353901 24556733 ~ 24561862 (-)
LOC110489477 LOC106604496 other upstream 3505129 24706395 ~ 24709307 (-)
G1232240 NA other upstream 4900514 26103346 ~ 26165403 (-)

Expression


Co-expression Network