G1227055


Basic Information

Item Value
gene id G1227055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 21197797 ~ 21199438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1400437
ccctcttcattatactactttctctctcccctcttcatcatactactttctctctcccctcttcattatactactttctctctcccctcttcattaaactactttctatctctcccctcttcattatactactttctctctcccctcttcattaaactactttctatctctcccctcttcattatactactttctctctctcctcttcattatactactttatctctctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctctcctcttcattatactactttctctccccctcttcattatactactttatctctctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttctttatctttctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctctcctcttcattatactactttctctccccctcttcattatactactttatctctctctcctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttcattatactactttctctctctcccctcttcattatactactttctctctcccctcttcattatactactttctctctctcctctcttcattatactactttctctctctcccctcttcattatactactttctctctcatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1400437 True 858 lncRNA 0.38 2 21197797 21199438

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-63 NA coding downstream 490178 20707545 ~ 20707619 (-)
tnmd LOC106604450 coding downstream 632908 20476207 ~ 20564889 (-)
LOC110488978 ube2a coding downstream 811736 20380904 ~ 20386061 (-)
sowahd LOC106604443 coding downstream 866425 20325473 ~ 20331673 (-)
ndufa1 LOC106611562 coding downstream 881183 20315512 ~ 20316866 (-)
diaph2 LOC106604453 coding upstream 66689 21266127 ~ 21960003 (-)
LOC118938706 NA coding upstream 483277 21682715 ~ 21684822 (-)
trnat-ugu-36 NA coding upstream 613747 21813185 ~ 21813258 (-)
LOC110488986 LOC106604455 coding upstream 1028897 22228319 ~ 22233369 (-)
LOC118938775 NA coding upstream 1030347 22229785 ~ 22229921 (-)
G1226996 NA non-coding downstream 90173 21107151 ~ 21107624 (-)
G1225965 NA non-coding downstream 402764 20794832 ~ 20795033 (-)
G1225958 NA non-coding downstream 407060 20790516 ~ 20790737 (-)
G1225800 NA non-coding downstream 551990 20645521 ~ 20645807 (-)
G1225754 NA non-coding downstream 569056 20628490 ~ 20628741 (-)
G1227112 NA non-coding upstream 104958 21304396 ~ 21304745 (-)
G1227123 NA non-coding upstream 116784 21316222 ~ 21316545 (-)
G1227216 NA non-coding upstream 255654 21455092 ~ 21456134 (-)
G1227363 NA non-coding upstream 536580 21736018 ~ 21736355 (-)
G1227366 NA non-coding upstream 545144 21744582 ~ 21744812 (-)
G1225875 NA other downstream 474561 20723037 ~ 20723236 (-)
G1225647 LOC106604448 other downstream 727274 20465730 ~ 20470523 (-)
G1225505 upf3b other downstream 872578 20321778 ~ 20325219 (-)
G1225499 NA other downstream 1063744 20133711 ~ 20134053 (-)
G1225043 LOC108238713 other downstream 1361478 19835878 ~ 19836319 (-)
G1229693 znf518b other upstream 2670520 23869958 ~ 23873564 (-)
LOC110489025 LOC106604425 other upstream 3357295 24556733 ~ 24561862 (-)
LOC110489477 LOC106604496 other upstream 3508523 24706395 ~ 24709307 (-)
G1232240 NA other upstream 4903908 26103346 ~ 26165403 (-)

Expression


Co-expression Network