XLOC_031284


Basic Information

Item Value
gene id XLOC_031284
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38790732 ~ 38791845 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062054
TGAACagataaaaaaatggtaaaactgttttatcacatattttgttttaaataggctcattttacaactcccctaaacATACATCAAACGGATTCTGCTGTGGATACCATTTTGTCGTCAGATGCAGGAGTTAATTTGGTATGATATAATATCTAGCCATTGCGTTATTGTACATTAGTTGTACGCTAAATTGTTTTTGCGATGGACTTTAggattgattgagtgcacttcaaaacatttaatatGGTTTTGGACAAAACTACAAATGGCTAATCCCTCAAATAGTGCTAAATTAAGGGTATGGGGCAATTTAAGATACAACCCACATCTAAATCCATCTGAGCTGGGAGTTTCGGCTAAATTGGTTACAGTATTATGGATGTATTTACAGCTGAAATGTAATATTGAATAGAGAGTAGGGTTAGTGTTCCTTCTCTCTATTTCTTACAGTGAACTCTCGGTTGGTGAGAAGTGGTCAAAAGCCAAGCCACTGAACTGACATTCCAAAGCAGAAACAGTTTTTTTAGAAATTGATTGAAGAGTACctatgcaaaaacaacaacaaagcacacacacacacacacacacacacacacacacacacacacacacacacacatatatatatatatagagagagagagagagagagagagagaggattaaCTTGCTCAGATTAATTGTATACTTCAATAATCACCATGTATACTGAACAGCTTCTGTGCTTGTCATCATCATAGAGGTCATAAAACCCTGCATGGAGGACtggaaaaaaatgtagtaaaatgttttttttttttttttgttggatgTCTAAAAGACAGGCCGGTCGATTAGAGAATAAATTAACATGTCGCCCTACACCAAACAAATTGTGCGAAAATTGAGATATTGTGTAGCCTGAATCtggtataaaaaataatttttaatacaaTTGAAATATCAGTGGCATATTACTGTCGTTGTTTATCACATGATTACTTTGGTATTATTTCCCTTCACGATTGCTTGTGGACACATTCTTTAATAAaggtaattacattttttataaactttaatAAACATCAATTGTCCAGCCAAACAATTATGAAAATTAAAACGACAAAGATCTTGA

Function

GO:

id name namespace
GO:0031638 zymogen activation biological_process
GO:0005753 mitochondrial proton-transporting ATP synthase complex cellular_component
GO:0045259 proton-transporting ATP synthase complex cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062054 True 1114 lncRNA 0.34 1 38790732 38791845

Neighbor

gene id symbol gene type direction distance location
XLOC_031282 si:dkey-58f10.4 coding downstream 12880 38771779 ~ 38777852 (-)
XLOC_031281 BX640512.4 coding downstream 28318 38732861 ~ 38762414 (-)
XLOC_031279 BX640512.3 coding downstream 79226 38686046 ~ 38711506 (-)
XLOC_031280 BX640512.1 coding downstream 84901 38697496 ~ 38705831 (-)
XLOC_031278 si:ch211-271e10.1 coding downstream 145379 38641933 ~ 38645353 (-)
XLOC_031285 BX640512.5 coding upstream 6359 38798204 ~ 38798318 (-)
XLOC_031286 BX571800.1 coding upstream 100777 38892622 ~ 38892759 (-)
XLOC_031287 BX571800.2 coding upstream 237966 39029811 ~ 39029925 (-)
XLOC_031288 NA coding upstream 250209 39042054 ~ 39045354 (-)
XLOC_031289 paqr3a coding upstream 362772 39154617 ~ 39171302 (-)
XLOC_031276 NA non-coding downstream 157013 38614868 ~ 38633719 (-)
XLOC_031277 NA non-coding downstream 167761 38620957 ~ 38622971 (-)
XLOC_031269 NA non-coding downstream 534988 38250044 ~ 38255744 (-)
XLOC_031259 BX640520.1 non-coding downstream 752515 38035337 ~ 38038217 (-)
XLOC_031290 AL935062.1 non-coding upstream 532923 39324768 ~ 39324884 (-)

Expression


Co-expression Network