Gene
RNA
| Item | Value |
|---|---|
| gene id | G1227477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 21911357 ~ 21911858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1400887 | True | 287 | lncRNA | 0.38 | 2 | 21911357 | 21911858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnat-ugu-36 | NA | coding | downstream | 98099 | 21813185 ~ 21813258 (-) |
| LOC118938706 | NA | coding | downstream | 226535 | 21682715 ~ 21684822 (-) |
| trnaa-ugc-63 | NA | coding | downstream | 1203738 | 20707545 ~ 20707619 (-) |
| tnmd | LOC106604450 | coding | downstream | 1346468 | 20476207 ~ 20564889 (-) |
| LOC110488978 | ube2a | coding | downstream | 1525296 | 20380904 ~ 20386061 (-) |
| LOC110488986 | LOC106604455 | coding | upstream | 316477 | 22228319 ~ 22233369 (-) |
| LOC118938775 | NA | coding | upstream | 317927 | 22229785 ~ 22229921 (-) |
| zgc:101583 | LOC106604457 | coding | upstream | 344594 | 22256452 ~ 22261013 (-) |
| med12 | LOC106604460 | coding | upstream | 372571 | 22284429 ~ 22335359 (-) |
| wu:fb13g09 | LOC106604461 | coding | upstream | 429917 | 22341775 ~ 22393750 (-) |
| G1227446 | NA | non-coding | downstream | 55951 | 21854891 ~ 21855406 (-) |
| G1227437 | NA | non-coding | downstream | 69802 | 21841332 ~ 21841555 (-) |
| G1227428 | NA | non-coding | downstream | 80414 | 21830740 ~ 21830943 (-) |
| G1227426 | NA | non-coding | downstream | 80884 | 21830254 ~ 21830473 (-) |
| G1227425 | NA | non-coding | downstream | 81166 | 21829972 ~ 21830191 (-) |
| G1227485 | NA | non-coding | upstream | 8498 | 21920356 ~ 21944173 (-) |
| G1227556 | NA | non-coding | upstream | 146541 | 22058399 ~ 22058668 (-) |
| G1227562 | NA | non-coding | upstream | 150151 | 22062009 ~ 22062282 (-) |
| G1227830 | NA | non-coding | upstream | 301213 | 22213071 ~ 22213275 (-) |
| G1227832 | NA | non-coding | upstream | 303167 | 22215025 ~ 22215321 (-) |
| G1225875 | NA | other | downstream | 1188121 | 20723037 ~ 20723236 (-) |
| G1225647 | LOC106604448 | other | downstream | 1440834 | 20465730 ~ 20470523 (-) |
| G1225505 | upf3b | other | downstream | 1586138 | 20321778 ~ 20325219 (-) |
| G1225499 | NA | other | downstream | 1777304 | 20133711 ~ 20134053 (-) |
| G1225043 | LOC108238713 | other | downstream | 2075038 | 19835878 ~ 19836319 (-) |
| G1229693 | znf518b | other | upstream | 1958100 | 23869958 ~ 23873564 (-) |
| LOC110489025 | LOC106604425 | other | upstream | 2644875 | 24556733 ~ 24561862 (-) |
| LOC110489477 | LOC106604496 | other | upstream | 2796103 | 24706395 ~ 24709307 (-) |
| G1232240 | NA | other | upstream | 4191488 | 26103346 ~ 26165403 (-) |
