Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 22724746 ~ 22793060 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1401612 | True | 209 | lncRNA | 0.40 | 2 | 22724746 | 22793060 |
22,720,000
22,730,000
22,740,000
22,750,000
22,760,000
22,770,000
22,780,000
22,790,000
22,790,000
22,800,000
22,810,000
22,820,000
22,830,000
22,840,000
22,850,000
22,860,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488995 | NA | coding | upstream | 373864 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 450897 | 22263088 ~ 22273849 (+) |
| timm8a | timm8a | coding | upstream | 468355 | 22255019 ~ 22256391 (+) |
| btk | btk | coding | upstream | 470173 | 22233934 ~ 22254573 (+) |
| gla | gla | coding | upstream | 497722 | 22219659 ~ 22227024 (+) |
| LOC110487749 | LOC106604462 | coding | downstream | 108698 | 22901758 ~ 23256369 (+) |
| ky | ky | coding | downstream | 521888 | 23314948 ~ 23321657 (+) |
| LOC118938707 | NA | coding | downstream | 779913 | 23572973 ~ 23573977 (+) |
| shisa3 | shisa3 | coding | downstream | 823653 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 1032314 | 23825374 ~ 23830234 (+) |
| G1227969 | NA | non-coding | upstream | 247788 | 22474804 ~ 22476958 (+) |
| G1227911 | LOC106604462 | non-coding | upstream | 287294 | 22434148 ~ 22437452 (+) |
| G1227926 | NA | non-coding | upstream | 321551 | 22402858 ~ 22403195 (+) |
| G1227740 | NA | non-coding | upstream | 387229 | 22337117 ~ 22337517 (+) |
| G1227703 | NA | non-coding | upstream | 448193 | 22275486 ~ 22276553 (+) |
| G1228195 | NA | non-coding | downstream | 15567 | 22808627 ~ 22808837 (+) |
| G1228198 | NA | non-coding | downstream | 20999 | 22814059 ~ 22814328 (+) |
| G1228465 | NA | non-coding | downstream | 59715 | 22852775 ~ 22853074 (+) |
| G1228475 | NA | non-coding | downstream | 66624 | 22859684 ~ 22859977 (+) |
| G1228485 | NA | non-coding | downstream | 74088 | 22867148 ~ 22867357 (+) |
| G1225840 | NA | other | upstream | 2028609 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 2410636 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 2712269 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 2713213 | 20011030 ~ 20011533 (+) |
| phox2bb | phox2b | other | upstream | 3443812 | 19279607 ~ 19282635 (+) |
| G1228466 | LOC100136012 | other | downstream | 60255 | 22853315 ~ 22853661 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 1655240 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 3153652 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 3169397 | 25962457 ~ 25966312 (+) |
