Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228589 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 22990361 ~ 22990561 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1402104 | True | 201 | lncRNA | 0.47 | 1 | 22990361 | 22990561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488995 | NA | coding | upstream | 639479 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 716512 | 22263088 ~ 22273849 (+) |
| timm8a | timm8a | coding | upstream | 733970 | 22255019 ~ 22256391 (+) |
| btk | btk | coding | upstream | 735788 | 22233934 ~ 22254573 (+) |
| gla | gla | coding | upstream | 763337 | 22219659 ~ 22227024 (+) |
| ky | ky | coding | downstream | 324387 | 23314948 ~ 23321657 (+) |
| LOC118938707 | NA | coding | downstream | 582412 | 23572973 ~ 23573977 (+) |
| shisa3 | shisa3 | coding | downstream | 626152 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 834813 | 23825374 ~ 23830234 (+) |
| LOC110489012 | znf518b | coding | downstream | 878007 | 23868568 ~ 23873598 (+) |
| G1228587 | NA | non-coding | upstream | 1421 | 22987665 ~ 22988940 (+) |
| G1228586 | NA | non-coding | upstream | 3019 | 22986338 ~ 22987342 (+) |
| G1228584 | NA | non-coding | upstream | 5369 | 22984761 ~ 22984992 (+) |
| G1228580 | NA | non-coding | upstream | 11718 | 22978435 ~ 22978643 (+) |
| G1228485 | NA | non-coding | upstream | 123004 | 22867148 ~ 22867357 (+) |
| G1228590 | NA | non-coding | downstream | 1270 | 22991831 ~ 22992057 (+) |
| G1228593 | NA | non-coding | downstream | 4633 | 22995194 ~ 23025577 (+) |
| G1228602 | NA | non-coding | downstream | 20425 | 23010986 ~ 23015493 (+) |
| G1228646 | NA | non-coding | downstream | 104670 | 23095231 ~ 23095442 (+) |
| G1228649 | NA | non-coding | downstream | 108165 | 23098726 ~ 23098942 (+) |
| G1228466 | LOC100136012 | other | upstream | 136700 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 2294224 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 2676251 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 2977884 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 2978828 | 20011030 ~ 20011533 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 1457739 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 2956151 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2971896 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 3164995 | 26155556 ~ 26156812 (+) |
