Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228761 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23338327 ~ 23342741 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1402297 | True | 756 | lncRNA | 0.42 | 2 | 23338327 | 23342741 |
23,333,000
23,334,000
23,335,000
23,336,000
23,337,000
23,338,000
23,339,000
23,340,000
23,341,000
23,342,000
23,343,000
23,344,000
23,345,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ky | ky | coding | upstream | 16670 | 23314948 ~ 23321657 (+) |
| LOC110487749 | LOC106604462 | coding | upstream | 81958 | 22901758 ~ 23256369 (+) |
| LOC110488995 | NA | coding | upstream | 987445 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 1064478 | 22263088 ~ 22273849 (+) |
| timm8a | timm8a | coding | upstream | 1081936 | 22255019 ~ 22256391 (+) |
| LOC118938707 | NA | coding | downstream | 230232 | 23572973 ~ 23573977 (+) |
| shisa3 | shisa3 | coding | downstream | 273972 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 482633 | 23825374 ~ 23830234 (+) |
| LOC110489012 | znf518b | coding | downstream | 525827 | 23868568 ~ 23873598 (+) |
| LOC110489017 | fa55c | coding | downstream | 1057742 | 24400483 ~ 24439204 (+) |
| G1228698 | NA | non-coding | upstream | 122709 | 23209743 ~ 23215618 (+) |
| G1228661 | NA | non-coding | upstream | 215238 | 23122882 ~ 23123089 (+) |
| G1228650 | NA | non-coding | upstream | 237160 | 23100913 ~ 23101167 (+) |
| G1228649 | NA | non-coding | upstream | 239385 | 23098726 ~ 23098942 (+) |
| G1228646 | NA | non-coding | upstream | 242885 | 23095231 ~ 23095442 (+) |
| G1228832 | NA | non-coding | downstream | 137313 | 23480054 ~ 23480287 (+) |
| G1228842 | NA | non-coding | downstream | 150635 | 23493376 ~ 23493689 (+) |
| G1228843 | NA | non-coding | downstream | 151816 | 23494557 ~ 23494784 (+) |
| G1228845 | NA | non-coding | downstream | 153334 | 23496075 ~ 23496340 (+) |
| G1228848 | NA | non-coding | downstream | 155330 | 23498071 ~ 23498794 (+) |
| G1228466 | LOC100136012 | other | upstream | 484666 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 2642190 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3024217 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 3325850 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 3326794 | 20011030 ~ 20011533 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 1105559 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 2603971 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2619716 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2812815 | 26155556 ~ 26156812 (+) |
