Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228832 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23480054 ~ 23480287 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1402376 | True | 234 | lncRNA | 0.35 | 1 | 23480054 | 23480287 |
23,477,200
23,477,600
23,478,000
23,478,400
23,478,800
23,479,200
23,479,600
23,480,000
23,480,400
23,480,800
23,481,200
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ky | ky | coding | upstream | 158397 | 23314948 ~ 23321657 (+) |
| LOC110487749 | LOC106604462 | coding | upstream | 223685 | 22901758 ~ 23256369 (+) |
| LOC110488995 | NA | coding | upstream | 1129172 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 1206205 | 22263088 ~ 22273849 (+) |
| timm8a | timm8a | coding | upstream | 1223663 | 22255019 ~ 22256391 (+) |
| LOC118938707 | NA | coding | downstream | 92686 | 23572973 ~ 23573977 (+) |
| shisa3 | shisa3 | coding | downstream | 136426 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 345087 | 23825374 ~ 23830234 (+) |
| LOC110489012 | znf518b | coding | downstream | 388281 | 23868568 ~ 23873598 (+) |
| LOC110489017 | fa55c | coding | downstream | 920196 | 24400483 ~ 24439204 (+) |
| G1228745 | NA | non-coding | upstream | 114522 | 23292486 ~ 23365532 (+) |
| G1228761 | NA | non-coding | upstream | 137313 | 23338327 ~ 23342741 (+) |
| G1228698 | NA | non-coding | upstream | 264436 | 23209743 ~ 23215618 (+) |
| G1228661 | NA | non-coding | upstream | 356965 | 23122882 ~ 23123089 (+) |
| G1228650 | NA | non-coding | upstream | 378887 | 23100913 ~ 23101167 (+) |
| G1228842 | NA | non-coding | downstream | 13089 | 23493376 ~ 23493689 (+) |
| G1228843 | NA | non-coding | downstream | 14270 | 23494557 ~ 23494784 (+) |
| G1228845 | NA | non-coding | downstream | 15788 | 23496075 ~ 23496340 (+) |
| G1228848 | NA | non-coding | downstream | 17784 | 23498071 ~ 23498794 (+) |
| G1228847 | NA | non-coding | downstream | 19469 | 23499756 ~ 23500323 (+) |
| G1228466 | LOC100136012 | other | upstream | 626393 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 2783917 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3165944 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 3467577 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 3468521 | 20011030 ~ 20011533 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 968013 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 2466425 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2482170 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2675269 | 26155556 ~ 26156812 (+) |
