Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228890 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23582244 ~ 23582592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1402443 | True | 349 | lncRNA | 0.38 | 1 | 23582244 | 23582592 |
23,579,600
23,580,000
23,580,400
23,580,800
23,581,200
23,581,600
23,582,000
23,582,400
23,582,800
23,583,200
23,583,600
23,584,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938707 | NA | coding | upstream | 8267 | 23572973 ~ 23573977 (+) |
| ky | ky | coding | upstream | 260587 | 23314948 ~ 23321657 (+) |
| LOC110487749 | LOC106604462 | coding | upstream | 325875 | 22901758 ~ 23256369 (+) |
| LOC110488995 | NA | coding | upstream | 1231362 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 1308395 | 22263088 ~ 22273849 (+) |
| shisa3 | shisa3 | coding | downstream | 34121 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 242782 | 23825374 ~ 23830234 (+) |
| LOC110489012 | znf518b | coding | downstream | 285976 | 23868568 ~ 23873598 (+) |
| LOC110489017 | fa55c | coding | downstream | 817891 | 24400483 ~ 24439204 (+) |
| LOC110489020 | LOC106609103 | coding | downstream | 868840 | 24448300 ~ 24458335 (+) |
| G1228860 | NA | non-coding | upstream | 48091 | 23533233 ~ 23534153 (+) |
| G1228836 | NA | non-coding | upstream | 63776 | 23515067 ~ 23518468 (+) |
| G1228847 | NA | non-coding | upstream | 81921 | 23499756 ~ 23500323 (+) |
| G1228848 | NA | non-coding | upstream | 83450 | 23498071 ~ 23498794 (+) |
| G1228845 | NA | non-coding | upstream | 85904 | 23496075 ~ 23496340 (+) |
| G1228893 | NA | non-coding | downstream | 9719 | 23592311 ~ 23592535 (+) |
| G1228895 | NA | non-coding | downstream | 11047 | 23593639 ~ 23593899 (+) |
| G1228897 | NA | non-coding | downstream | 13325 | 23595917 ~ 23598010 (+) |
| G1228899 | NA | non-coding | downstream | 25683 | 23608275 ~ 23608677 (+) |
| G1228900 | bend4 | non-coding | downstream | 26165 | 23608757 ~ 23609342 (+) |
| G1228466 | LOC100136012 | other | upstream | 728583 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 2886107 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3268134 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 3569767 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 3570711 | 20011030 ~ 20011533 (+) |
| G1231863 | NA | other | downstream | 2364120 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2379865 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2572964 | 26155556 ~ 26156812 (+) |
