Gene
RNA
| Item | Value |
|---|---|
| gene id | G1228899 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23608275 ~ 23608677 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1402452 | True | 403 | lncRNA | 0.48 | 1 | 23608275 | 23608677 |
23,605,200
23,605,600
23,606,000
23,606,400
23,606,800
23,607,200
23,607,600
23,608,000
23,608,400
23,608,800
23,609,200
23,609,600
NC_048578.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938707 | NA | coding | upstream | 34298 | 23572973 ~ 23573977 (+) |
| ky | ky | coding | upstream | 286618 | 23314948 ~ 23321657 (+) |
| LOC110487749 | LOC106604462 | coding | upstream | 351906 | 22901758 ~ 23256369 (+) |
| LOC110488995 | NA | coding | upstream | 1257393 | 22345297 ~ 22350882 (+) |
| mars2 | mars2 | coding | upstream | 1334426 | 22263088 ~ 22273849 (+) |
| shisa3 | shisa3 | coding | downstream | 8036 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 216697 | 23825374 ~ 23830234 (+) |
| LOC110489012 | znf518b | coding | downstream | 259891 | 23868568 ~ 23873598 (+) |
| LOC110489017 | fa55c | coding | downstream | 791806 | 24400483 ~ 24439204 (+) |
| LOC110489020 | LOC106609103 | coding | downstream | 842755 | 24448300 ~ 24458335 (+) |
| G1228897 | NA | non-coding | upstream | 10265 | 23595917 ~ 23598010 (+) |
| G1228895 | NA | non-coding | upstream | 14376 | 23593639 ~ 23593899 (+) |
| G1228893 | NA | non-coding | upstream | 15740 | 23592311 ~ 23592535 (+) |
| G1228890 | NA | non-coding | upstream | 25683 | 23582244 ~ 23582592 (+) |
| G1228860 | NA | non-coding | upstream | 74122 | 23533233 ~ 23534153 (+) |
| G1228900 | bend4 | non-coding | downstream | 80 | 23608757 ~ 23609342 (+) |
| G1228903 | bend4 | non-coding | downstream | 4195 | 23612872 ~ 23613447 (+) |
| G1229061 | NA | non-coding | downstream | 227813 | 23836490 ~ 23839105 (+) |
| G1229788 | NA | non-coding | downstream | 405168 | 24013845 ~ 24014082 (+) |
| G1228466 | LOC100136012 | other | upstream | 754614 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 2912138 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3294165 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 3595798 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 3596742 | 20011030 ~ 20011533 (+) |
| G1231863 | NA | other | downstream | 2338035 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2353780 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2546879 | 26155556 ~ 26156812 (+) |
