Gene
RNA
| Item | Value |
|---|---|
| gene id | G1229788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24013845 ~ 24014082 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1403452 | True | 238 | lncRNA | 0.41 | 1 | 24013845 | 24014082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489012 | znf518b | coding | upstream | 140247 | 23868568 ~ 23873598 (+) |
| grxcr1a | grxcr1 | coding | upstream | 183611 | 23825374 ~ 23830234 (+) |
| shisa3 | shisa3 | coding | upstream | 390982 | 23616713 ~ 23622863 (+) |
| LOC118938707 | NA | coding | upstream | 439868 | 23572973 ~ 23573977 (+) |
| ky | ky | coding | upstream | 692188 | 23314948 ~ 23321657 (+) |
| LOC110489017 | fa55c | coding | downstream | 386401 | 24400483 ~ 24439204 (+) |
| LOC110489020 | LOC106609103 | coding | downstream | 437350 | 24448300 ~ 24458335 (+) |
| csn6 | cops6 | coding | downstream | 452605 | 24466687 ~ 24474857 (+) |
| gpc2 | gpc2 | coding | downstream | 525084 | 24539166 ~ 24551802 (+) |
| LOC110489028 | LOC106604497 | coding | downstream | 587990 | 24602072 ~ 24608023 (+) |
| G1229061 | NA | non-coding | upstream | 174740 | 23836490 ~ 23839105 (+) |
| G1228903 | bend4 | non-coding | upstream | 400398 | 23612872 ~ 23613447 (+) |
| G1228900 | bend4 | non-coding | upstream | 404503 | 23608757 ~ 23609342 (+) |
| G1228899 | NA | non-coding | upstream | 405168 | 23608275 ~ 23608677 (+) |
| G1229823 | NA | non-coding | downstream | 17528 | 24031610 ~ 24031882 (+) |
| G1229883 | NA | non-coding | downstream | 60508 | 24074590 ~ 24075012 (+) |
| G1229884 | NA | non-coding | downstream | 61382 | 24075464 ~ 24076005 (+) |
| G1229894 | NA | non-coding | downstream | 77943 | 24092025 ~ 24092345 (+) |
| G1229952 | NA | non-coding | downstream | 129103 | 24143185 ~ 24143425 (+) |
| G1228466 | LOC100136012 | other | upstream | 1160184 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 3317708 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3699735 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 4001368 | 20012015 ~ 20012477 (+) |
| G1231863 | NA | other | downstream | 1932630 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 1948375 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2141474 | 26155556 ~ 26156812 (+) |
| ube2d2 | UBE2D2 | other | downstream | 2686148 | 26699956 ~ 26711938 (+) |
